Sphingobacterium oryzagri: PQ465_00490
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Entry
PQ465_00490 CDS
T10198
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sop Sphingobacterium oryzagri
Brite
KEGG Orthology (KO) [BR:
sop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sop02000
]
PQ465_00490
Transporters [BR:
sop02000
]
Other transporters
Pores ion channels [TC:
1
]
PQ465_00490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
TSP_3
Surfac_D-trimer
NPV_P10
Motif
Other DBs
NCBI-ProteinID:
WDF70811
UniProt:
A0ABY7WQW9
LinkDB
All DBs
Position
complement(113832..115229)
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AA seq
465 aa
AA seq
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MNYSTIKKTAVAASLVAALGFAENAQAQTPTVFGGRSQYRTWSIGVQGGITAPSVLTGGS
NAFGQKVGLFQNKVGEYYGLTVRKQFSHLFGLELEGNRGRIKTFNHNVSGPAFEANSGVN
RNGAARSAETEVNWAASLNGVFQLGTIDFLRRENAVNFYAKVGLGVLAHNPVQFANNDFT
GTEVYNNKGQWGEEIFGDRERTGDRDFRMAAFVPVGVGVKFKLSEVVALNLGYTMNFTDD
NLLYGPARADYKGKFSNVYGGLEFTLGSRDKESLTFTNPVATLYDELKDPSLRNEVEALK
QRVSTLEGTVDQLSKDSDGDGVSDKFDKCPGTPAGTAVDGSGCPIKFPEPVVTSTTTGAY
FAPIQFEFDSSVLKTESYATLDKLAKDLRDAKGSVTLDGYASAEGSEDYNMNLSKDRANA
VKQYLVNAGVSASSISANGYGEANPVASNATEEGRVQNRRVEIKK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaactattctacaattaaaaaaacagctgttgcagcttctttagtagccgctttaggt
tttgctgagaacgctcaagcacaaactccaactgtatttggtggaagatcacaatacaga
acttggtcgatcggtgtacaaggtggtatcactgcgcctagtgtacttactggtggttca
aatgcatttggtcaaaaagttggtttgttccaaaacaaagttggcgagtactatggttta
actgtacgcaaacaattctctcacctattcggtttagaattggaaggtaaccgtggtcgt
atcaaaacttttaaccacaatgtttctggtcctgctttcgaggcaaattccggtgtgaat
cgtaacggagctgcaagatctgcagaaactgaagtaaactgggcagctagcttaaatggt
gttttccaattaggtactattgacttcctaagaagagaaaatgcagttaacttctacgca
aaagtaggtttaggtgtgttagcacataaccctgttcaatttgcgaacaatgatttcaca
ggtacagaagtttacaacaacaaaggtcagtggggtgaagaaatcttcggcgaccgtgag
cgtactggtgacagagacttccgtatggctgctttcgtaccagtaggtgttggtgtgaaa
ttcaaattatctgaagttgttgccttgaacttaggttacacaatgaacttcactgatgat
aacttattgtacggtcctgctagagctgattacaaaggtaaattctctaacgtttacggt
ggtttagagttcactctaggttcacgtgacaaagaaagcttaacattcacaaaccctgtt
gctacgttatatgatgagttgaaagatccatctttgcgtaacgaagttgaagcattgaaa
caacgcgtatctactttagaaggtactgttgatcaattgagcaaagactctgatggtgac
ggtgtttctgataaattcgataaatgtccaggtacacctgcaggtactgcagtagatggt
tcaggatgtcctatcaaattcccagagccagtagttacttcaactacaactggtgcttac
ttcgcgccaattcaattcgagtttgatagctctgtattgaaaactgaatcttacgctact
ttagataaattagcaaaagatttacgtgatgctaaaggttctgttactttagatggttac
gcttcagcagaaggttctgaagattacaacatgaacctatctaaagaccgtgctaatgca
gtaaaacaatacttagttaacgctggtgtttctgcttctagcatctctgctaacggttac
ggtgaggctaacccagttgcgtctaacgctactgaagaaggtcgtgttcaaaaccgtcgt
gtagaaatcaaaaaataa
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