Sphingobacterium oryzagri: PQ465_00925
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Entry
PQ465_00925 CDS
T10198
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sop Sphingobacterium oryzagri
Pathway
sop03030
DNA replication
sop03430
Mismatch repair
sop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PQ465_00925
03430 Mismatch repair
PQ465_00925
03440 Homologous recombination
PQ465_00925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sop03032
]
PQ465_00925
03400 DNA repair and recombination proteins [BR:
sop03400
]
PQ465_00925
Enzymes [BR:
sop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PQ465_00925
DNA replication proteins [BR:
sop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PQ465_00925
DNA repair and recombination proteins [BR:
sop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PQ465_00925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WDF68952
UniProt:
A0ABY7WK13
LinkDB
All DBs
Position
226117..226665
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AA seq
182 aa
AA seq
DB search
MTFTAIDFELATAAYNSVCAVGIVKVVDDEIVEQFHSLVRPPDNKYMWQTTRVHGIKPKD
TAEAPTFLDLYPTIAAMLRGSFMVAHNEKFDREVLIKTMAHYGLDYKDLALKSVWECTSN
IYRIKGFKKTKLSICCKIMGIDLHHHDPLSDAKASAQLYLLQDRVTAALIAQHFPADEPS
AI
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgacctttacagcgatagattttgaattggcgactgcagcctacaatagtgtatgtgcg
gtgggtatcgtaaaggtggtagacgatgaaatcgttgaacaattccatagccttgtgcgc
ccacccgataataaatatatgtggcaaacgacacgtgttcacggtataaaaccgaaagat
acagccgaagcgccaacttttttagatttgtatcccaccattgccgcgatgctccgcggt
tcatttatggttgcgcataacgaaaagtttgatcgcgaggtgttgatcaaaaccatggca
cattatggattagattacaaggatctggcactaaaatcggtgtgggagtgtacgagtaac
atttataggattaaagggtttaaaaagacaaaactcagcatctgttgtaaaattatgggc
attgatttacatcatcacgacccattatcagatgcaaaagccagcgcccaactctaccta
ttacaagatcgcgttacagcagcgctgatcgcgcaacattttccagcagatgagccgagc
gctatttaa
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