KEGG   Sphingobacterium oryzagri: PQ465_00955
Entry
PQ465_00955       CDS       T10198                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
sop  Sphingobacterium oryzagri
Pathway
sop00521  Streptomycin biosynthesis
sop00523  Polyketide sugar unit biosynthesis
sop00525  Acarbose and validamycin biosynthesis
sop00541  Biosynthesis of various nucleotide sugars
sop01100  Metabolic pathways
sop01110  Biosynthesis of secondary metabolites
sop01250  Biosynthesis of nucleotide sugars
Module
sop_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:sop00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    PQ465_00955 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    PQ465_00955 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    PQ465_00955 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    PQ465_00955 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    PQ465_00955 (rfbB)
Enzymes [BR:sop01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     PQ465_00955 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 NAD_binding_4 3Beta_HSD adh_short NAD_binding_10 NmrA KR DUF2532
Other DBs
NCBI-ProteinID: WDF68958
LinkDB
Position
230779..231831
AA seq 350 aa
MNKTILITGGAGFIGSHVVRKFVSDYPDYQIINLDALTYAGNLENLKDIEGFPNYTFVKA
DITDAAHILEIFKEYQPDGVIHLAAESHVDRSITNPTAFVMTNVIGTVNLLNAAKEIWKD
NYEGKRFHHVSTDEVFGALGETGLFTEETKYDPHSPYSASKASSDHFVRAYHDTYGLPIV
LTNCSNNYGPNHFPEKLIPLCIHNILNEKPLPIYGDGKYTRDWLFVVDHAKAIDLVFHQG
KNGDCYNVGGFNEWQNIDLVSELCKQMDEKLGRAAGTSAKLITYVKDRPGHDLRYAIDAT
KINQELGYQPSVTFEEGLSITIDWFLKNEDWLNNVTSGDYQKYYDKQYEG
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgaataaaaccattttaattaccggaggagcaggttttattggctcgcatgtcgttcgg
aaattcgtttcagactatccggactaccagattatcaatttagatgccctgacgtacgct
gggaatctggaaaacttgaaagatattgagggttttcccaattacacctttgtaaaagcg
gatatcactgacgcggcgcatattttggagatctttaaagagtatcagcccgatggtgtt
attcacctggcggcagaatcacatgtcgatcgttccatcaccaatcccaccgcttttgtg
atgaccaatgttatcggaacggtaaacctgctgaatgcagcgaaggaaatttggaaagac
aattatgagggcaaacgtttccaccatgtgtctacggatgaagtgtttggtgcgctcggt
gagaccggactttttaccgaagaaacgaagtatgatccgcattccccttattcagcatcc
aaagcgtcttccgatcattttgttcgggcgtatcatgatacctatggcttgcctattgta
ttgacgaattgttccaataattacggaccaaatcactttcctgaaaaattgattccactt
tgcattcataatatactcaatgaaaagcctttgcctatttatggtgatggtaaatacacg
cgcgattggttatttgttgttgatcatgcaaaagcgattgatttagtcttccatcagggg
aaaaatggagattgttacaatgtaggcggctttaacgagtggcaaaatatcgatttagtt
agcgagttgtgcaagcagatggatgagaagttaggccgtgcagcaggcacttccgcaaaa
ctgatcacgtatgtaaaagatcgtccgggtcacgacctccgctatgcgatcgatgctacc
aaaatcaatcaggaattgggttatcagccatcggttacgtttgaagaaggactatctatt
acgattgattggtttttaaagaatgaagactggttgaacaatgtgacttccggcgattat
caaaaatattacgataagcaatacgaaggttaa

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