Sphingobacterium oryzagri: PQ465_03550
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Entry
PQ465_03550 CDS
T10198
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
sop Sphingobacterium oryzagri
Brite
KEGG Orthology (KO) [BR:
sop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sop03009
]
PQ465_03550 (der)
Ribosome biogenesis [BR:
sop03009
]
Prokaryotic type
GTPases
PQ465_03550 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
SRPRB
Ras
PduV-EutP
ABC_tran
AAA_18
cobW
Arf
AAA_22
MeaB
NTPase_1
AAA_15
AAA_24
ATPase_2
Ligase_CoA
NB-ARC
AcrZ
DUF6642
NAD_binding_2
ODAPH
Motif
Other DBs
NCBI-ProteinID:
WDF69458
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All DBs
Position
915445..916749
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AA seq
434 aa
AA seq
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MANIVAIVGRPNVGKSTLFNRLTESRKAIVDDFSGVTRDRHYETAEWIGKKFTVIDTGGF
VHGSDDIFEEAIRDQVHIAIEEASVIVFMVDVTTGITDLDDEIADLLRRSSKPVYVVANK
VDHAKLHHDSAEFYAFGLGEIFNISSATGSGTGELLDAVVSNFPEQEEEEDDALPKIAIV
GRPNVGKSSLTNALLGVDRNIVTDIAGTTRDSIRIHYNQFGHEFLLIDTAGLRRKAKVNE
DIEFYSVMRTIKALEDSDVVVLMLDANDGIEAQDINIFHLAEKNKKGVMIVVNKWDTIEK
DHKTAKEFEAKIKEKIAPFTDVPVVFTSVTEKQRIFKVVETAMEVFKNKTKKVSTSKLND
VMLSVIENYPPPSTKGKYIKIKYATQLPGRSPMFAFFCNLPQYIKDPYKRFVENKLRDNF
DFKGVPIQIFFRQK
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatatcgttgcaatcgtagggcgtccaaacgttggaaagtccactttatttaat
cgtttaacagagagtagaaaagctattgttgatgactttagcggggttactcgcgatcgc
cattacgaaacggcagaatggatcggtaaaaaattcaccgtaatcgatacgggtggattt
gtccatggatccgacgatatattcgaagaagccattcgtgatcaggtacacatcgccata
gaagaagcatccgttattgtatttatggtagacgtcactaccggtattaccgatctggat
gatgaaattgccgacttattacgtcgtagctcaaagccggtttacgtagttgcgaataaa
gtagaccatgctaaacttcaccacgattcggcagagttttacgcatttggcttaggtgaa
atttttaatatctcttcggcaaccggatctggtacaggtgagttattggatgcggtggtt
tcaaatttcccggagcaagaggaggaagaagacgatgcgctaccgaagattgctattgtt
ggtcgtccgaatgtgggaaaatcgtcattaactaatgcacttctcggtgttgacagaaat
attgtaacagatatagccggtacaacccgtgattctattcgtattcactacaatcaattt
ggtcatgagtttttgttgatcgatactgccggattacggcgcaaagcaaaagtgaatgaa
gatatcgagttttattcggttatgcgtaccatcaaagcattggaagattcagacgtagtg
gttttgatgcttgatgctaatgatggtattgaagcacaagacatcaatatctttcactta
gccgaaaaaaataaaaaaggcgtgatgatcgtcgtgaacaaatgggatacgatcgaaaaa
gatcacaaaacggcgaaagagtttgaagccaaaatcaaggagaaaatcgctccttttacc
gatgtaccagtcgtgtttacctccgttacagaaaagcagcgtattttcaaagttgtagag
actgcaatggaagtttttaaaaataaaaccaaaaaagtgagcacatcaaaattaaatgat
gtgatgcttagcgttatcgaaaactacccaccgccatccactaaaggaaaatacattaaa
ataaaatatgctacgcagttaccgggcagatcgcctatgtttgcgttcttctgtaatctt
ccgcaatatattaaagatccttataagcgatttgtggaaaataaacttcgcgataacttc
gatttcaaaggcgtgcctattcaaatattttttagacaaaagtaa
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