Sphingobacterium oryzagri: PQ465_03670
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Entry
PQ465_03670 CDS
T10198
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
sop Sphingobacterium oryzagri
Pathway
sop02010
ABC transporters
sop02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PQ465_03670
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PQ465_03670
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sop01002
]
PQ465_03670
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sop02000
]
PQ465_03670
Peptidases and inhibitors [BR:
sop01002
]
Cysteine peptidases
Family C39
PQ465_03670
Transporters [BR:
sop02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
PQ465_03670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
SMC_N
AAA_22
DEAD
MreB-like_C
AAA_29
DUF87
ABC_ATPase
AAA_16
RsgA_GTPase
AAA_23
AAA_30
CbiA
Dala_Dala_lig_N
Motif
Other DBs
NCBI-ProteinID:
WDF69482
LinkDB
All DBs
Position
complement(938256..940415)
Genome browser
AA seq
719 aa
AA seq
DB search
MKRNTKIKQHDLQDCGAACLASVAAHYGLELPLAKIRQMCHTDTRGTNVMGMIQGLTSMG
FNAKGVRGPIESLLHIPVPAIAHIVLKEQLQHYVVIYKVDKTLVTVMDPGTGKFEKYALP
DFQKIWTGVLILLEPNEYFEQRNEKTTIYQRFWNLVKPHKSVAIQALVGAVLYTVLGLST
SIYIEKITDYVLVDGNLRLLNLLSIGMIVILLFQLFIGAVKSVLVLQTGQRIDRYLILGY
YKHLLALPQRFFDTMKVGEIISRVNDAVKIRAFINDVAIQIVVNIFIVIFSFALMFNYYW
KLALVVALVIPFYILAYWITNKLNKKVERRMMEEAAELESHLVESLHAVRTIKQFGTETF
SNNKTDNKFSLLLKSIYKSVLNGLFSGTSSEFLSRLFTIVLFWVGAGYVIDRAITPGELL
SFYALIGYFTAPISELIGMNKTIQNALIASDRLFEIMDLEREESTEKIELETRMAGDIVF
HDVSFSYGSRADVFTNFSCSFVKGKTTAIVGESGSGKSTIAALIQNLYPLKSGKILLGDY
DVRYVSPYSLRSSVTTVPQEIHLFSGNVIENIALGEEIPNIKRVIEITKNLGMLDFVEKL
PQSFQTHLGENGALLSGGQKQRIAIARALYKQPEVLILDEATSALDSEAEQIIQSTLQTL
KEQAKTIIIIAHRLSTVASADKIMVIKHGKLIEEGTHQELLNQPNSVYKHMWSKQISIG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaacacaaagataaagcaacatgatttgcaagactgcggagcagcatgcctg
gcgtcagtcgcagcacactacggattagaattgcctcttgccaaaatacgacagatgtgt
catacagatacccggggaacaaatgtaatgggtatgatccaaggattaacgagcatgggt
ttcaatgcgaaaggtgtgagggggcctatcgagtcattattacatattcccgttcctgct
attgcacatattgtactgaaggaacaactacaacactatgtcgtcatatataaagtggat
aaaacgctcgttacagtaatggatccaggaacaggaaaatttgaaaagtatgctctacct
gattttcagaaaatatggacaggtgtattgattcttttggaaccgaatgaatacttcgaa
cagcgaaatgaaaagactactatctatcaacgcttttggaatttagttaaaccgcataag
tctgtcgctatccaggcattagtaggagctgttctgtatacagtacttggcctatctacg
tcgatttacatcgagaaaatcaccgattacgtacttgtagatggaaatttaagactattg
aacttgctttcgatcggcatgatcgtcatattacttttccagttgttcatcggtgctgta
aagagcgttttagtgctgcaaacaggtcagcggatagaccgataccttatactgggctac
tataaacacctcttagctttacctcaacgtttttttgacaccatgaaagtcggcgaaatt
atttcgcgtgttaacgacgctgtcaaaataagagcctttatcaacgatgtagctattcaa
atcgtcgtaaatatctttatagtaatcttttcctttgcgctgatgtttaattactattgg
aaactagctttagtagtcgccttagtcataccattttacattcttgcttattggatcacg
aacaaacttaataaaaaagtcgagagacggatgatggaagaagctgctgagttggagtcg
catcttgtcgaatctcttcatgctgtgcgtacgataaagcaatttggaacagagactttt
tcaaacaataaaacagacaacaaattttcgttattgcttaaaagtatctataaatcggta
cttaacggccttttttctggaacatcatccgaatttttatcacgcctgtttaccattgtg
ctgttttgggttggcgctggatatgtaattgaccgagcaattacaccgggagaattactt
tctttctatgcacttattggctatttcacggcgccgatctccgagctgattggtatgaac
aaaaccatacagaatgctttgatcgcttccgaccgactgtttgagattatggatttagaa
cgagaagaatcgactgaaaaaattgaattggaaaccaggatggcaggtgatatcgttttt
catgacgtgtcctttagttatggatccagggcagatgtatttacaaattttagctgttcg
ttcgtaaaaggaaaaacgacggcgatcgttggtgagagtggttctggaaaaagtacgatc
gcagcgctaatacagaacctttacccattaaaaagtggaaagattcttctaggtgattat
gatgtgcgttacgtctccccttactccttacgatcgtcggttaccacggtacctcaggaa
atccatctcttttctggaaatgtaattgaaaatattgcacttggagaagagatacctaat
atcaaacgcgttattgaaatcaccaagaatctgggtatgctagattttgtagagaagctt
ccgcaaagctttcagacgcacctgggcgaaaacggtgcgcttctttcgggaggacaaaaa
caacgtatcgctatcgctagagcactgtacaaacaaccagaggtattaatccttgatgag
gctacctcagcattggattccgaagcagagcaaataatacagtctactctacaaaccttg
aaagaacaagcgaaaacaatcataattattgcgcatagattgagtacggttgcaagtgca
gataaaattatggttataaaacacggcaagttaatagaagaaggaacacatcaggagctg
ctaaatcaaccaaattccgtgtacaagcatatgtggagtaaacaaatttctattggataa
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