Sphingobacterium oryzagri: PQ465_05870
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Entry
PQ465_05870 CDS
T10198
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
sop Sphingobacterium oryzagri
Pathway
sop00450
Selenocompound metabolism
sop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sop00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PQ465_05870
Enzymes [BR:
sop01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
PQ465_05870
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
PQ465_05870
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GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
SelA
RNA_helicase_helical
SepSecS
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
WDF69902
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Position
1473519..1474742
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AA seq
407 aa
AA seq
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MGTFNIANIREDFPILKRTVNGKPLVYFDNGATTQKPKQVIDAIVAYYADMNSNVHRGVH
YLSQISTDAFEITRRKVQTFINARHEHEVIITKGTTESINIIATCYGRPFIGEGDEIIIS
AMEHHSNIVPWQMLCDEKGCVLRVIPMKENGELDIEAYRALFSERTKLVSFTYVSNALGT
INPVKEMIDIAHTHEVPVLIDAAQAIQHMKVDVQALDVDFLAFSGHKMYGPTGVGVLYGK
EELLNKMPPYQGGGDMIKEVTFAKTTYNELPFKFEAGTPNIEAGICLAHAIEYIETIGVE
AIKAYEDELLAYATTQLAKIDGIRFIGTAEHKSSVISFVVDGIHPYDIGVILDKLGIAVR
TGHHCAQPVMEQFAIPGTVRVSLAMYNTKEEVDTLIAGLERALGMLK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
ttgggaacttttaatatagcgaacattcgggaagattttccgatcttgaagagaacggta
aacggtaagcctttggtttattttgataatggcgcaacgacgcaaaaaccaaaacaggtg
atcgatgctattgtcgcctattatgccgatatgaatagtaatgtgcaccgtggtgtacac
tacctaagtcagatttctaccgatgcttttgagattaccagaagaaaggtgcaaaccttt
attaacgccaggcatgagcatgaggtgatcattaccaaaggaaccaccgaatcgattaat
atcatagccacttgctacggccggccatttattggtgaaggcgatgaaatcatcatttcg
gcgatggaacatcattccaacattgtgccctggcagatgctttgcgatgaaaaaggctgt
gtgctgcgcgtgatcccgatgaaagaaaatggtgagttggacatcgaagcttatcgcgct
ttattttctgaacggacgaaactggtatcatttacttacgtttccaacgctttgggcacg
atcaatcccgtaaaagaaatgattgatattgcgcatacgcacgaggttcccgtattaatt
gatgctgcgcaggcaattcaacatatgaaagttgatgtgcaagcattggatgtggatttt
ttggcgttctctggtcataaaatgtatggcccgacaggcgttggtgtgctttacggaaaa
gaagaactactgaataaaatgccgccttatcaaggcggtggtgatatgattaaggaggta
acttttgcgaaaacaacgtataatgagttgccatttaaatttgaagcaggcacaccgaat
atcgaggcaggcatatgtttggcgcatgcgattgagtacatagaaacaatcggtgtagaa
gcaattaaagcttacgaagatgaactgttggcttatgcaactacgcagctggcaaaaata
gacggtattcgctttattggaacagctgaacataaatcttcggtcatctcttttgtcgtt
gatggcatacatccttacgatattggcgtgatcttggataaattgggtattgccgtgcgt
actggtcaccactgcgcgcaaccggtgatggaacagtttgctattccgggcacggtacgc
gtatcgttggctatgtacaacactaaagaagaggtcgatacgttgatcgcaggattggaa
cgtgccttgggtatgcttaaataa
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