Sphingobacterium oryzagri: PQ465_07400
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Entry
PQ465_07400 CDS
T10198
Name
(GenBank) DEAD/DEAH box helicase
Organism
sop Sphingobacterium oryzagri
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SNF2_assoc
ResIII
Motif
Other DBs
NCBI-ProteinID:
WDF70195
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Position
complement(1808679..1812023)
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AA seq
1114 aa
AA seq
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MRDALGGYGIAIRSFRELSEVDLLAHYDRADIPDRTDVHRLRARTIHINHATFSIGGTLS
TDQQIIVELQQHNIRVHCSCALHATYLCYHEMLALVALITQENYRSFFDEQTRLRILLPY
ASRYGLENEATLDQYFSLTYDKGNLIVQPKQEHILAVDSHMPDKSLQEILHTKKKRPPLP
APTKQRILVWSKHRFYNQLRFELLDADHTQAGKPKAPFEFIDPTPLLWNTKDVSEAKLYA
ALANFQQHDAEVDEEAVLNALHIVCEYSKHLALYYHDQAISEKVNSKSLRPATLQLLDAT
IELHVFQRKPFYEIKAFLRWQDERLPLKTLPVHYRYFLRRQDNFYLLRDIATLRLLEYFR
KGPETLLVHASKYDDFVTHTLQPLADIIHIHYAYVRPASPEERKRYQTDQACLIYLSQEN
SYVNITPVMRYGAIEIPLPSKKQVLDRDGNGHTFVVDRDLDREDKFQQIVAKQHPDFEAQ
QQEMHYFYLHHQHFLADEWFLQAFEAWRNEGIEILGFQEMNLTKLSPYKAKIDIKIVSGT
DWFNVKIAASFGQQHLSIKQLHRAIRHKSKYVTLDDGRTAVLPADWLDKIARFFQFGVLE
ADLLRLPKMGLTAVQELFDAEVLPQEIVAELDTLNKKLSGLKKRSKVNIPTTLKAQLRSY
QLDGLHWLNQLDDLNLGGCLADDMGLGKTLQIIALLLLQKEKGQSGVNLVITPTSLLFNW
EQELTKFAPSLRVLCLQGGSRDKLYEKLPDYDVVLCSYGLLVSDIVKLKQYTFNILVLDE
SQAIKNPSSERYTAARLLQARVRFVVTGTPIENSTYDLYGQLSFACPGLLGNQQFFRDTY
ATPIDRFDDSKRALSLQQKVAPFILRRSKQQVAKELPEKTEMVIYCEMGAQQREIYDSYE
AELRDYLEGESDDELQKSNMHILAGLTRLRQICNAPVLLQEGYEATISAKLDALMERLLE
ITPEHKVLVFSQFVTMLDLVKDALDNAHIASVTLNGKTKDRARVVDTFQQDETKRVFLIS
LKVGGVGLNLTAADYVFLIDPWWNPAVENQAIDRSYRIGQGKHVVAVRLICLNTVEEKIM
HLQDKKRTLAGEMIKTDTDITQKFGKKDWLDLLQ
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgagagatgcacttggtggatatggtatagcgatacgaagctttcgagaactttccgag
gtagatttgctggcgcattacgatcgggcggatattccggatcgtacagacgtacatcga
cttcgtgcacgcacgatccatattaaccatgcgacattcagcatcggcggcacactgtct
accgatcaacagattatcgtcgagctacagcagcataacatacgcgtgcactgctcctgt
gcgcttcatgctacttacttgtgctatcatgaaatgcttgctctggtggcgcttatcacg
caagaaaattaccgtagcttttttgatgaacagaccagactgcgtatcttattaccttat
gcgagccgttatggtctcgaaaacgaagcaacgctcgatcagtattttagtttgacctat
gataagggaaatctaatcgtacagccaaaacaagaacatattttggccgtggatagtcat
atgccggataaaagtctgcaggagattctgcacacaaaaaagaagcgaccaccacttcct
gcgccaacaaaacaacgaattttggtctggagcaagcatcgtttttacaaccaactgcgt
ttcgaactgctggatgctgaccatacccaagcgggaaaacccaaagctccttttgaattt
attgatccgacgccactgctctggaacacgaaagatgtttccgaagccaaattatatgca
gcgctggcaaacttccaacagcatgatgccgaagtggatgaagaagctgtactaaatgct
ctgcatatcgtttgcgaatacagtaagcatctcgcgttatactaccacgatcaggccatt
tctgaaaaagtcaacagcaaatcgcttcgcccggcaactttacaactactggatgccaca
atcgagctccacgtatttcaacgcaaaccattttatgagatcaaggcttttttacgatgg
caggacgagcgtcttcctttaaaaacactgcccgttcactaccgctactttttgagacgc
caagataatttttacctgctgcgtgatatagccactttgcgtcttttggagtatttccga
aaaggaccagaaactttattggtacatgcttccaagtatgacgacttcgttacgcatact
ttgcaacccttagcagatatcatacacatccactatgcttatgtacgccccgcaagccca
gaagaaagaaaacgctaccaaacagatcaagcctgtttaatctatctgagccaagagaat
agttatgtaaacattacaccggtcatgcgctatggcgctatcgaaataccgctaccctcg
aaaaaacaggtattggacagggatggaaacggccatacttttgtcgtggatcgcgatttg
gatagggaagacaaatttcagcagatcgtagcgaaacagcatcctgattttgaggcgcaa
cagcaggaaatgcattacttttacctgcatcatcagcattttttagccgacgaatggttt
cttcaggcgtttgaagcctggcgcaatgaaggcatagaaattttgggatttcaagagatg
aacctcaccaaactgagtccgtataaagcaaaaattgatatcaaaatagttagtggcacc
gattggtttaacgtcaaaatagccgcatcctttggtcagcagcatctttcgatcaagcag
ttgcaccgggctatccggcataaaagcaagtacgtcacgctggatgatggccgcacggct
gtacttccggcagactggctcgacaaaatagcccgtttttttcagtttggcgtgcttgag
gccgatctgctgcggctgccaaaaatgggtttaacagccgttcaggaactctttgacgca
gaagttttaccacaggaaatcgttgccgaactggatacgctgaacaagaagttatcgggt
ttaaaaaaacgcagcaaggttaatatcccaacgacactaaaagcacaactacgttcttac
cagctcgacggacttcattggctaaaccagttggatgatttaaacctgggcggctgtctt
gctgacgatatgggactaggcaaaactttgcaaatcatcgcactccttttgctgcaaaaa
gagaaagggcaaagcggcgttaacctggttattacgccgacctccctattgtttaactgg
gagcaagagctcaccaagtttgcgccgtcactacgtgtgttgtgcctgcaaggcggatct
cgcgacaaactgtacgaaaaactgcctgattacgacgtcgtactctgctcttacggctta
ctagtttccgatatcgttaagctaaagcagtatacatttaatatcttagtattggacgaa
tctcaggcgataaaaaatccgagttcagaacgttatacagccgcacgtctactgcaagca
agggtgcgctttgtcgtcaccggaacgcccattgaaaacagtacgtacgatctgtatggg
caattatcgttcgcttgtccgggtctgctgggcaaccaacagtttttcagagatacatat
gctacgcctatcgatcgttttgacgacagcaagcgcgccctatcgttgcagcaaaaagtt
gctcctttcatcctacgccgtagcaagcagcaggtcgcaaaagaacttcccgaaaagaca
gaaatggttatctattgcgaaatgggcgcacaacagcgtgagatatacgatagttacgag
gccgaattgcgtgattatttggaaggagaaagtgacgatgaacttcaaaaaagcaacatg
cacattttagccggtcttacccgtttacgacagatatgcaatgcgccggtgttactccaa
gaaggatacgaagccactatttccgcaaaactggacgctttgatggagcgtttgctcgag
atcactccggagcacaaagtattggtcttttcgcaatttgttacgatgttagatttggtg
aaagacgcattggataacgcgcatatcgcgagcgtaacgctcaacggaaagacgaaagac
cgtgcccgggttgtagacacttttcagcaggatgaaacaaagcgtgtatttttgattagt
cttaaagttggtggtgtagggttgaatcttaccgccgcagattatgtttttttgatcgac
ccttggtggaacccggcggtagaaaaccaagccatagatcgcagttatcgaataggtcag
ggaaaacacgtggtggctgttcgcctgatctgcctaaatacagtggaggaaaagattatg
cacttacaggataaaaaacggacattggctggcgagatgatcaagaccgatacagacatc
acgcaaaagttcggcaaaaaagattggcttgatttactgcaataa
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