Sphingobacterium oryzagri: PQ465_09605
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Entry
PQ465_09605 CDS
T10198
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sop Sphingobacterium oryzagri
Brite
KEGG Orthology (KO) [BR:
sop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sop03016
]
PQ465_09605 (truB)
Enzymes [BR:
sop01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PQ465_09605 (truB)
Transfer RNA biogenesis [BR:
sop03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PQ465_09605 (truB)
Prokaryotic type
PQ465_09605 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WDF70612
LinkDB
All DBs
Position
complement(2331862..2332584)
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AA seq
240 aa
AA seq
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MTQVEDSIPSVFHFAEGEVLLVDKPLEWTSFDVVGKLRNTMKPEKIKVGHAGTLDPLASG
LLIICTGKFTKRIDSFQAEDKEYTGIINLSGATPSYDLETAIDQPSDYSAITDEAIQATT
QQFVGDLEQFPPAHSAIKINGERVYEKARRGEEVELKPRRIRISGFIIEKIALPEVHFRI
TCSKGTYIRSIAHDFGKALGIGAHLSALRRTKSGNFDVNNAWNLQDLIEKIKLQKTSNQA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagtagaagacagcatcccttctgttttccattttgcagaaggcgaagtactt
ttggttgacaaaccattagagtggacgagttttgacgtagtaggtaaacttcgaaatacg
atgaaaccagaaaagatcaaggtcgggcatgccggcacgttagatccgctggcaagtggg
ttgcttattatctgcaccggcaaatttaccaagcggattgattcttttcaggcggaagat
aaggaatatacaggaatcattaatttaagtggcgctacgccatcctatgatttggagacg
gcgattgatcagccatcagactattccgctatcacggatgaagcaatacaggcgacgacg
cagcaatttgtaggtgatttggagcagtttccacccgcccattctgccatcaaaatcaat
ggcgagcgcgtctacgaaaaagcccgccgtggcgaggaagtcgagttaaagccgcgccgc
attcgtataagcggctttattatcgaaaaaatagcgttgccagaagttcactttcgtatt
acctgctctaaaggcacgtacatccgctccatcgcacatgattttggaaaagcactgggt
atcggtgcacatctcagtgcattacggcgcacaaaaagtggaaatttcgatgtaaacaac
gcctggaatttgcaagatttaatcgaaaagattaaattacaaaaaacgtctaatcaagca
taa
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