Sphingobacterium oryzagri: PQ465_10220
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Entry
PQ465_10220 CDS
T10198
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
sop Sphingobacterium oryzagri
Brite
KEGG Orthology (KO) [BR:
sop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sop02000
]
PQ465_10220
Transporters [BR:
sop02000
]
Other transporters
Pores ion channels [TC:
1
]
PQ465_10220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
CooC_C
DUF7382
TTR_TEN1-4
DUF6795
Motif
Other DBs
NCBI-ProteinID:
WDF70730
LinkDB
All DBs
Position
2479234..2482221
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AA seq
995 aa
AA seq
DB search
MKHKLLVLGVMTLTLLLVFQATFAQQKRTLTGTVVDETGAPLAGATVKVKGTTVATTTDE
TGAFTLEVAASAQTLEATYIGYGLKDAPIVGNQVNIQLQPDTEQDLDEVVVIGYGTARKK
DLTGAMVTIQEKNFNKGIMTSPDQLIQGKTPGVMVLNNTGQPGGAATVRIRGNSSIRASN
NPLFVLDGVPMSGNSPLPEGRGGFSSDRGNPLTYLNPTDIASMDILKDASATAIYGSRGA
NGVVIITTKKGKAGTPVISLGAAAGISSMREYPDVLSASEFREALNYYTPNEVANADFGG
NEDAFRGITRDAVTQNYYGDVSGGTEHGRYRLSGGYLNQNGIILGSQLKKYTGNFTGNFR
FLENKRLGLDFSLFVTQLDNRYAPINATVGSEGNVISQALQWNPTLPLRDEQGNLTFVST
TTRNPLTSIEAFKDLATTNTMVVNVSPYYKITDDLEYRFTYSAMRQTGNREGVYRAGLID
PSAVNNEQAFISNNGETNLQMTHTLSYNKQLNEDWNINALVGYEYLNYDYKNNISFGGGF
RYLGLDYFDYLQYSPVATREISSYRSPTNQLQSMFARGGFNYLDRYLFTATVRRDGSTKF
GSNNKYAMFPSFAVAWNLAEEEFLKSSPIFTQLKVRLGWGKTGNQEFPSGASLNRLVFSN
QSISQANYGNDDLRWETSTTFNAGIDFAILKNRLYGSVDYFDKRTTDALFEQTLAQPAPA
GRIWVNLDGEIVNRGVEIALTGTLVRNDNWTWDLTGNATFLKNSVSGLVGYYETGALRGQ
GFSGVLGQRMVNGQPLNVWYLAQYEGIDPETGMSMYRGLDGSVSSANDPAVNKFYASSPN
PTTLLGISSTVNYKKITLTANMNGAMGHYLFNNTAATALGLTNLSARNIGSAFFDTSVRE
STSNSAAPSTRFLEKGDYLKLANLTLSYTVGDIGKTFKNFNVSLTGQNLFIITKYSGFDP
EVNTDGSSNGIPSLGIEYLPYPPSRNILLGVNFAL
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacaaattacttgtactaggcgtcatgacgctaacgctactacttgtattccag
gcaacgtttgcccaacaaaaaagaacgttgaccgggaccgtggtagacgaaacaggagct
ccacttgcgggtgctaccgtaaaagtgaagggcacaacggttgcgacaaccaccgatgaa
actggcgcatttacgctggaagtagcggcttctgcgcaaacgttggaagcgacgtacatc
ggttacggactgaaagacgctcctatcgtcggcaatcaggtcaatatccaattgcagcca
gacaccgagcaagacttggatgaagtcgtcgttatcggttatggaaccgcgcgaaagaag
gatttgaccggcgctatggtaaccatccaggagaagaattttaacaaaggtattatgacg
agtccggatcaattgattcagggtaaaacaccgggcgtgatggtgctcaataatacgggc
caaccgggtggtgcggctaccgtgcgtattcgcggaaactcgtctatccgtgccagcaac
aatccgttatttgtactagatggtgttccgatgtctggaaactcgcccctaccggaaggt
cgcggtggtttctcttccgatcgcggaaatccgttgacgtatcttaatcctacggatatt
gccagtatggatatcttgaaagatgcatcggctacagcaatttatggatcgcgtggtgct
aacggcgtagtcatcatcaccacaaaaaaaggtaaagctggcacacctgtaatttccttg
ggcgctgccgcgggtatttccagcatgcgtgagtatccggatgttctcagcgcttctgaa
tttagagaagcgttaaattactatacgccaaatgaagtcgctaatgcggatttcggtgga
aacgaagatgcatttcgtggtattacgcgcgatgccgttacgcaaaattattacggcgat
gtgtccggtggcaccgagcacggacgttaccgtttgtcaggcggatacttgaaccaaaat
ggcatcattttaggctcacagttgaaaaagtataccggtaattttacaggcaatttccgc
tttttggaaaacaaaagactgggcttggatttctctttatttgtgacgcaacttgacaat
cgttatgccccgatcaatgcgacggtaggttccgagggtaacgttatttcacaagcattg
cagtggaaccccacgttacctttgcgcgacgaacaaggaaatctcacgttcgtcagtacg
acaacaagaaacccactgacgagtattgaggcctttaaggatttggctacaaccaatacg
atggtcgtcaatgtgtcgccgtactacaaaattaccgacgatttggaataccgctttacc
tacagcgcgatgcgacaaactggtaatcgcgaaggcgtctacagagccggtttgattgat
ccatcggcagtcaataatgagcaggcgttcatttccaataatggggagaccaatcttcaa
atgacgcacacactttcgtataataagcagctcaacgaagattggaatatcaatgccctt
gtgggttacgaatatttgaattatgattacaaaaataatatctcctttggcggtggtttc
cggtatttagggcttgattattttgattatttgcaatactcgcccgttgccacacgcgaa
atttcttcgtatagaagtccaaccaaccagttgcaatcgatgtttgcgcgaggtggattt
aactacttagatcgctacctgttcaccgcgaccgttcgtcgtgatggatcgacaaaattc
ggatccaacaacaaatatgcgatgtttccatcgtttgccgtggcctggaatctggccgaa
gaggaattcttaaaatcgagtccaatatttacacagttgaaagttcgcttaggctggggt
aaaactggtaatcaggaatttccttcaggcgcttctttgaaccgcttggtgtttagcaat
caaagtattagtcaggcaaattacggtaatgatgatctaagatgggaaacatcaaccacg
tttaatgccggaattgatttcgctatccttaaaaaccgcctttatggttcggttgattac
tttgataaaagaactaccgacgcgctcttcgaacaaacccttgcacaacctgctcctgcc
ggacgtatttgggtaaaccttgatggcgagatcgtcaatcgtggtgtcgaaatcgcattg
accggtacgctagtcagaaacgataactggacctgggatctaacaggtaatgctaccttc
ctgaaaaatagcgtgagcggattagtgggttattatgaaacaggcgcgttgcgcggtcaa
ggattttcaggagtactgggccaacgtatggtgaacggtcagccgcttaatgtttggtac
cttgcacaatacgaaggtattgatccggagaccggcatgagtatgtacagaggcttagac
ggaagtgtcagcagcgcaaacgatccggccgttaacaaattttacgccagcagtccaaac
ccaacgacactgcttggtatatcatcaaccgttaattacaaaaaaataacattgaccgcc
aatatgaatggcgctatggggcattatttatttaacaataccgcggcaacagctttagga
ttaacaaacttatccgcgcgtaacatcggatcggctttctttgatacatccgttcgcgag
tctacgtccaactccgctgcaccttctacccgctttctagaaaaaggcgattacctgaaa
ttggcaaacctcacgctgagctacaccgtgggcgatattggaaagacgttcaaaaacttc
aatgtgtcgctaactggccaaaacttgttcatcatcacgaaatattccggatttgatcca
gaggtcaatacagatggctcgagcaatggtattccttcgttgggtattgagtatttgcct
tatccaccatcacgtaatattcttttaggggtaaattttgcgctatag
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