Sphingobacterium oryzagri: PQ465_13005
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Entry
PQ465_13005 CDS
T10198
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
sop Sphingobacterium oryzagri
Pathway
sop02024
Quorum sensing
sop03060
Protein export
sop03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PQ465_13005 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PQ465_13005 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PQ465_13005 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sop02044
]
PQ465_13005 (secDF)
Secretion system [BR:
sop02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PQ465_13005 (secDF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
YolC_YozM
Motif
Other DBs
NCBI-ProteinID:
WDF67223
UniProt:
A0ABY7WDF5
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All DBs
Position
3161411..3164413
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AA seq
1000 aa
AA seq
DB search
MQSKGLIKFLVIVVSIACLYSLSFTFVTRKVERDAAEYAKGDMAKEKAYLDSMAGEEVYN
LGLAKFTYREAKAHELALGLDLKGGMNVTMEISLDELIKNLANNPKDDKFNTALETAVQK
SKSVNKSVVELFVDEYKATGASTPLANFFATKDNAALIKATSSDAEVRSFLNKEADNAIQ
NSYKVLRTRIDKFGVASPNIQIQQGTNRILIELPGVNDEARVRKLLQGSAKLEFYQTHDN
FQVYPLLENINGILASTLKTATPAAKPATAVADTAATDSTKADDNLLANLGSAKKDTTDS
TGAVSPELAASNPLFAILTPASYQGENGQPSLMPGAMVGMANLKDTARVNAYLNRPEVKA
TIPSNLKLLWAVKPEQRTPNLLSLYAIKLAGQESGAVMTGDVITDATDNFDQQNRPVVSM
QMNTEGARQWRRVTAQAAQNREAIAIVLDGVVYSAPSVNEEIPNGNSQISGSFTIEDTKD
LANVLKAGRLPATAKIVEEAIVGPSLGQAAIDAGVNSAVIGIVVVMIFMIAYYNRAGIAA
NIAVLFNVFFLMGILASLNAVLTLPGIAGIVLTMGTAVDANVLIYERIREELRAGKSIRQ
AVADGYKHAMPSILDSQITTFLVGLVLFFFGSGPILGFATTLMIGIITSLFTSIFISRLI
FEYMLTKDIKISVSFPWSAKTLQNANFQFIKKRKLFYIISVVAVLISIGSIFTKGFSLGV
DFKGGRTYTVRYEQPVSLEDVRKNLDETFNSTTEVKTFGSENQVRVTTTYHIEETSDEAD
KEVLAKLNEGLSKIAGNKHEILSSQKVGPSIATDIKDRAIWSGIFSILIIAGYILVRFHK
WQYSIGAAIATVHDGVILLGLFSILDGLVPFSLDIDQHFVAAILTVLGYSVNDTVVVFDR
IREDLAKPGAHSKNFGEVVNHAINTTLSRTVITSLTIIFVLVVLFIFGGEVIRGFSFAIL
IGIIVGTYSSIILAAPAVYDLGKGKHISEEKPTVAKVITP
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtaaagggctgattaaatttttggtaatagtggtgtcaatagcatgcctctat
tccctatcattcacatttgttacacgaaaagtagaacgcgatgctgctgaatacgcaaaa
ggcgatatggccaaagaaaaagcgtatttagactccatggcaggtgaagaggtttataat
ttaggacttgcaaagttcacttacagagaagctaaagcccatgaactggctttaggtctc
gatctgaaaggtggtatgaacgtaaccatggaaatttccctggacgagcttatcaaaaat
ctagcaaacaatcctaaagacgataaattcaacacggcgttagaaacagcggttcaaaaa
agcaaatccgtaaacaaaagtgtcgttgaactatttgtagacgagtacaaagctaccgga
gcatctacaccgctagccaacttcttcgcgacaaaagataacgcggcgttaatcaaagca
acaagctcggatgcagaagtacgtagcttcttgaacaaagaggcagacaatgctatccaa
aattcttacaaagtattacgtacacggattgataagtttggtgtggcttctccaaatatc
caaattcaacagggaaccaaccgtatactcatcgaacttccaggtgtgaatgacgaagcg
cgtgtacgcaagcttcttcaaggatcggctaaactggagttttaccagacacacgataac
tttcaagtatatccattgttggaaaatatcaacggtattcttgcatctacgctaaaaaca
gcaaccccagctgcaaaaccggcaacggctgtcgcggataccgctgctacagatagcacg
aaagccgatgataacttattagcaaacctgggttcagctaaaaaagataccaccgattca
accggagcggtatcgccagaattggcagcaagcaatcccctattcgcgattttaacgcca
gcaagctaccaaggtgaaaacggtcaaccgtcattaatgcctggcgcaatggttggtatg
gcaaacctgaaagacactgcacgtgtaaatgcgtacttaaatcgtccagaggtaaaagca
actatcccaagtaacttaaaactattgtgggctgttaaaccggagcaaagaacaccaaat
ctgttgtctttatatgctattaaattagccggacaagagagcggagcggtaatgacgggt
gatgtcatcacggacgctacagataatttcgatcaacaaaacagaccggtcgtgtccatg
caaatgaacacagagggcgctcgccaatggcgtagagttacggcacaggctgcgcaaaac
agagaagctattgctattgttttagacggcgtggtttactctgctccttccgtaaatgaa
gaaattccaaacggtaattcgcaaatctctggtagcttcacgattgaagacaccaaagat
ttagcaaacgttttaaaagcaggtcgtcttccagcgactgcaaaaattgtagaagaagcg
atcgtagggccttcccttggtcaggcagctatcgatgccggtgttaactctgctgttatc
ggtatcgtagtcgtgatgatctttatgattgcttactacaaccgcgctggtattgccgca
aacattgccgtattattcaacgtatttttcttgatgggtatcttagcatcattaaatgct
gttcttaccctaccaggtatcgccggtatcgtgttaacgatgggtacagctgtagatgcc
aacgtacttatttacgagcgtattcgtgaagaactgcgcgcaggaaaaagcatacgccag
gcagttgccgatggttacaaacatgctatgccatctatcctggattcacagatcaccacc
ttcttggttggtttagtactattcttctttggtagcggtccgatcttaggatttgcaaca
acgttgatgattggtattattacatctttgtttacatcaatcttcatctctcgtttgatt
tttgaatacatgttgacaaaagatatcaagatttcggtatccttcccttggtcggcaaaa
actttacaaaacgcgaatttccaatttatcaagaaacgtaaattattctacatcatctct
gtcgtagcggtgcttatctctataggctctatctttaccaaaggattctctttaggggtt
gactttaagggtggtcgtacctacaccgtacgttacgaacagccggttagtttagaagat
gtgcgtaagaatttagatgaaacatttaactcgacaacggaagtaaaaacatttggtagc
gagaatcaagtgcgtgtaaccaccacttaccacatcgaagagacaagtgacgaagcggat
aaagaagtattggctaaattgaacgaaggtctttctaaaatcgcgggcaacaaacacgaa
atcctttcttcacaaaaagtagggcctagtatcgctacagacattaaagaccgggctatt
tggtcgggtatcttctcgatcttgattatcgcgggttatatcttggtgcgtttccacaaa
tggcaatattccattggtgcagctatcgcaacggtgcacgatggtgttattttgttaggt
ttgttctctatcttggacggcttggtgccattctcattggatatcgaccaacacttcgtg
gcagcgatattaacggtattgggttattcggtaaatgatacggtcgttgtatttgaccgt
attcgtgaagacttagccaaaccgggtgcacacagcaaaaactttggcgaagtagttaac
cacgcgatcaacacgacattaagccgtacggtgattacctccctgacgatcatcttcgta
ttggttgtgttattcatctttggtggtgaggtaatccgcggattctcctttgcgatcttg
attggtattatcgtaggtacctactcttcgattatcttggcagcgcctgctgtttacgat
cttggaaaaggtaaacacatttctgaagagaaaccaacggttgctaaagtgattacaccg
taa
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