Sphingobacterium oryzagri: PQ465_14030
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Entry
PQ465_14030 CDS
T10198
Name
(GenBank) alpha-L-fucosidase
KO
K01206
alpha-L-fucosidase [EC:
3.2.1.51
]
Organism
sop Sphingobacterium oryzagri
Pathway
sop00511
Other glycan degradation
sop04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
PQ465_14030
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
PQ465_14030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sop04147
]
PQ465_14030
Enzymes [BR:
sop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
PQ465_14030
Exosome [BR:
sop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
PQ465_14030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha_L_fucos
Fucosidase_C
GHL6
Motif
Other DBs
NCBI-ProteinID:
WDF67420
LinkDB
All DBs
Position
complement(3412589..3414226)
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AA seq
545 aa
AA seq
DB search
MNRFLFTCLFLLVLTPCFAQNDLVTDDESSTYNLNKPERTTWLRNTGAGLFVHFSVDAQL
GVVISHALVGASKEFEDKFFNELPKTFNPARFDPHELAILAKMAGMKYIVFTTKHHAGFC
MWDTKTTDFNIMNTPYGKDLLKEYVDATRAAGLGVGYYFSPEDFLFLREHQIPINRPAQK
LTPALAKAYDDYTRQQCEELMTNYGKIDVLFIDGDPKEVVKEVSWRLQPDILITRGAIKT
PEQVLPGAQIDEPWLSCITMGTAWQYQPTNERYKSGTELLQLLIEARAKGGSLLLNVGPK
PNGELPIAQEERLREMAAWHFVNRECMDSVRAWVVSHEQNIWFTAKNDRKTLYAIVTEAQ
NWKEGTRQQFLIQSAKATPATSVSVLGQNSEIIEYKNDDASCYFEQTAEGLQVSVVKAQR
IYDDHRWPNPVVIKIDGVEPVIDKAVQVETGDSQTTATGAKLLGLVHNHDGKATKAYFYY
RPYAGQVETLYAGKWAKTEEVTIGKDGHFQVSSSALKKGQQYEYKAVAIQSGLSVEAESK
IYRGN
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgatttttatttacttgcttattccttcttgtattaacaccttgttttgcacaa
aacgatttagttaccgacgacgagtcaagtacctataaccttaataaaccagaacgcacg
acctggttgcgcaatactggcgcaggtttatttgttcattttagtgtagatgcccagttg
ggcgtagtgatcagtcatgccttggtcggcgcgtcaaaagaatttgaggataaatttttt
aatgaattgcccaagacgtttaatcctgcgcggtttgacccacatgagctggctatttta
gccaaaatggccggtatgaagtatattgtttttaccacgaagcatcacgccggcttctgt
atgtgggataccaaaaccacggatttcaatattatgaataccccttacggcaaagatttg
ctcaaggagtatgtagacgccacccgtgcagcgggattgggtgtgggttattatttttcg
ccggaggatttcctgtttttacgcgaacatcagattccgatcaaccgtcctgcgcaaaaa
ttaacgccagcgttagccaaagcttatgatgattatacgcgacaacaatgtgaagagttg
atgaccaattacgggaagattgatgttttatttatcgacggcgaccccaaagaagtggtt
aaagaagtcagttggcgattacagccggatatcttgatcactcgtggagccatcaaaaca
ccagagcaagttttgcccggtgcacagattgatgaaccttggttatcctgcataacgatg
ggcaccgcctggcagtatcagcccacaaacgagcgttacaagtcgggcaccgagttgcta
cagctgttgattgaggcgcgggcaaagggcggatcgcttttgctcaatgttgggccaaag
cctaatggcgagcttccgatagcacaagaagaacgattgcgggaaatggccgcttggcat
ttcgtcaaccgggagtgtatggatagcgtgcgcgcttgggtggttagccatgaacaaaat
atttggtttacggcaaaaaatgaccgtaagactttgtatgcgattgtcacggaagcccaa
aattggaaggaaggcacccgtcagcaatttttaattcagtcggccaaagccaccccggct
acgtccgtcagcgttttagggcagaatagcgaaattatagagtataagaacgatgatgcc
agctgctattttgagcaaactgcagaaggattgcaggtgtcggtcgttaaagcgcagcga
atttacgatgaccatcgctggccaaatccggtggtgatcaagattgacggcgtggagccg
gttattgataaagcggtacaggtagaaacgggggatagtcaaacgacagcaaccggagca
aaattattagggttggtacacaaccacgatggaaaagcgaccaaagcttatttttattac
cggccttatgctggccaggtcgaaaccttatacgcgggcaaatgggcaaaaacagaagaa
gtgacgattggtaaagacggccattttcaggtgtcatcgtctgcgctcaaaaaaggccag
caatatgaatataaggcggtcgctatacaatcgggattgtctgtggaagctgaaagcaaa
atttatcgcggtaactaa
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