KEGG   Sphingobacterium oryzagri: PQ465_15110
Entry
PQ465_15110       CDS       T10198                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sop  Sphingobacterium oryzagri
Brite
Enzymes [BR:sop01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PQ465_15110
    5.6.2.6  RNA 3'-5' helicase
     PQ465_15110
DNA repair and recombination proteins [BR:sop03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PQ465_15110
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII DEXQc_Suv3
Other DBs
NCBI-ProteinID: WDF67628
LinkDB
Position
complement(3709346..3711793)
AA seq 815 aa
MNQFADVWFHNQGWEPHTFQRKAWSAISKGHSGLLNAPTGFGKTFAIWFGVLAHYYEDKA
YQKQKKRHRQTKLHAIWITPLRALSKEIYKATTKVSDDLDLDYTVELRTGDTTVAQRQKQ
RKKPPQALITTPESVHLLLASKEAVAFFSALEFIVVDEWHELLGSKRGVLVELALSRLKA
INPRLKIWGISATIGNLGEAQEILLGKEHNGVMVKAALKKQIAIETVLPDSLEKFPWAGH
LGIRLLDKVIALVRQYNSTLIFTNTRSQAEIWYQQIIMHYPEFAGILAIHHGSLSDEVRF
WVEDALHEGRLKAVVCTSSLDLGVDFRPVDCVIQIGSPKGVARFLQRAGRSGHRPHETSY
IYYVPTNSLEIIEGDSLKYAVKEQIIEQRIPYVRSFDVLIQYLMTLAVGDGFAANQIFEE
VRGTHCFASVTRQEFDDCMAMLIHGGKTLHAYDDFHRLVLQDGIYRVESRKLAMRHRLSI
GAIVSDAMMKVKFMSGKYLGSIEESFISKLNTGDVFWFSGRQLELLHVRNMEVVVRPTSK
SKGVVPSWMGGRFSISPDLGVAIRHSFQAIQQTKRVSPEIEFLRPLFEEQARRSALPKTD
ELLVEYISTKYGYHLFVYPFDGKLVHEGMAQVLAYRLGKIKPATFSIASNEYGFELLSAT
DYPVDDNFIKDLLSPNHLHQDITSGINVQEMARRRFRDIAGIAGLVFQGFPGKGMKTKHL
QANAGLFFSVFEDYDPTNLLLREAYDEVFDFQLEEGRMQLAFERIADHAIVLAFPKNLTP
FSFPIFSESFREKYSNEDWQSRLELLKLQLEGKVE
NT seq 2448 nt   +upstreamnt  +downstreamnt
atgaatcaattcgctgacgtatggtttcataatcaaggctgggagccgcacacttttcaa
cgaaaggcttggtcagctatttccaagggacattctggtctgcttaatgcacctaccggt
tttggaaagacctttgccatttggtttggcgtgctcgcgcattattacgaagataaagcc
tatcaaaagcaaaagaaacgccatcggcaaacgaagttacacgcgatctggataaccccg
ttacgcgccttatcaaaagaaatctacaaagcgacaaccaaagtcagcgacgatctggat
ttggattatacggtagagctgcgcacgggtgatacgaccgttgcccaacggcaaaagcag
cgcaagaagccgccccaagcgttaatcactacacccgagagtgtgcatctcttgttggcg
tcgaaagaggccgtcgctttcttcagcgcgctggaatttatcgtggtagatgagtggcac
gaactgctgggcagcaagcgcggcgtattggttgagctggcgctgagccgtctgaaagcg
attaatccacgactgaagatctggggcatttcagcgacgattggaaacctgggagaggcg
caggaaattttgctgggaaaagagcataacggtgtgatggtgaaagcggcattgaaaaag
cagatcgctattgagacggtgctgcccgatagtttggagaagtttccttgggctggacat
ttaggtattcggctgctggacaaggtgatcgcgctggtcagacagtataattctaccctg
atttttaccaatacacgttcgcaggctgaaatttggtatcagcaaattattatgcattat
ccggagtttgccggtattttggctattcaccacggttcgttgagcgacgaggtacgtttt
tgggtggaagatgcgttgcacgaagggcgattgaaagcggtggtttgcaccagtagcctt
gatctgggcgttgattttcgtccggtagattgtgtgatacaaatcggatcgcctaaaggt
gtcgcgaggttcttacagcgtgccggcagatcggggcatcgcccgcatgaaacttcctac
atttattacgtgccgaccaattccctggaaattatcgaaggcgattcgttaaaatatgct
gtaaaagagcaaatcattgagcagcgtataccgtatgtgcgtagttttgacgtgctaatt
caatacttaatgacgcttgcagtaggcgatggttttgcggccaatcaaatctttgaagag
gtgcgtggcacgcattgttttgcatcggtgacgaggcaagagtttgacgattgtatggct
atgcttattcatggcggaaaaacgttgcatgcttacgacgactttcatcgcctggtgctg
caagatggcatctatcgtgtggaatcgcgcaaattagccatgcggcatcgactgagtatc
ggtgcgatcgtttccgatgcgatgatgaaagtgaaatttatgtcgggcaaatatttaggc
tccatagaagaatcatttatttccaagcttaataccggtgacgtcttttggttttccggt
cgacagttggaattactccatgtgcgcaatatggaagtagtggtgcggcctacgagtaag
tccaaaggcgttgtgccttcgtggatgggcggccgtttctcgatctcgccagatttgggc
gtggccatacggcatagttttcaagctatacaacagacgaagcgtgttagtccggaaatc
gagtttttaagaccattgtttgaagagcaagcgcgtagatcggccttaccaaaaaccgac
gaactgctggtcgaatatatctcgacgaagtatggttatcacttattcgtttatccgttt
gatggcaagttggtgcacgagggcatggcgcaggtattggcttatcgcctaggaaaaatt
aaaccggccacctttagtattgccagtaatgaatatggttttgagttgctctcggcgacc
gactatccggtggacgataattttatcaaagatttactttcgccaaaccacttgcatcag
gatattacgtcggggatcaacgtacaggagatggcgcgcaggcgttttcgtgatattgcg
ggtatcgctggtcttgtttttcaaggttttcctggcaaaggaatgaaaacaaagcatttg
caggcaaatgccggattgtttttctcggttttcgaagattacgacccgactaatttattg
cttcgcgaggcatacgacgaggtttttgattttcaactggaggaaggacgtatgcaactg
gcttttgagcgtattgcagatcatgcgatcgttttagcatttcccaaaaatcttaccccg
ttttcctttccgatcttctccgaatcgtttcgcgaaaaatatagcaacgaagattggcaa
agtcgcttagaactattaaaattacagttggaaggaaaagtagaataa

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