Sphingobacterium oryzagri: PQ465_15200
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Entry
PQ465_15200 CDS
T10198
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sop Sphingobacterium oryzagri
Pathway
sop00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PQ465_15200 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sop01007
]
PQ465_15200 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sop03016
]
PQ465_15200 (lysS)
Enzymes [BR:
sop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
PQ465_15200 (lysS)
Amino acid related enzymes [BR:
sop01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PQ465_15200 (lysS)
Transfer RNA biogenesis [BR:
sop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PQ465_15200 (lysS)
Prokaryotic type
Other AARSs
PQ465_15200 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
DUF4332
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
WDF67646
LinkDB
All DBs
Position
3726505..3728223
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AA seq
572 aa
AA seq
DB search
MSTVLSEQEQQRRLNLQAIIDLGINPYPADEFEVNVTAADILANYERDKLNYKSIRIAGR
IMSRRVMGSASFMELQDATGRVQAYVKRDDICTGEDKTLYNTVFKKLLDIGDIVGIEGYV
FTTQTGEISIHVETLRILTKSLRPLPIVKEAEGKTYDAFTDPEQRYRMRYVDLIVNPQNR
DIFIKRTRLFNAMREFFNSAGYMEVETPVLQSIPGGAAARPFITHHNALDIPLYLRIANE
LYLKRLIVGGFEGVYEFSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMNFTERLLEHC
ALAVNGTTKATFGEHAIDFKAPYKRITMAQSILEFTGFDITGKTEEQIREAAKGMGIAVN
DTMGKGKLIDEIFGEKCEGNYIQPTFITDYPIEMSPLTKKHRDNPELTERFELMVCGKEI
ANAYSELNDPIDQRERFEDQLQLSEKGDDEAMFIDQDFLRALEYGMPPTSGLGIGMDRLI
MFLTNNASIQEVLFFPQMRPEKVAKVASVDDYVAEGISAEWVPVLQKMGFTTIEALKEAN
PNKVFNDLGGMRKKMKLDIAMPTKDEVTNWFN
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgtattatctgaacaggaacaacaacgcagattaaatcttcaggcgattatc
gatctgggtatcaacccttacccggccgatgagtttgaagtgaatgtaactgccgcagac
attttagcaaactacgaacgcgataaattaaactataagagcatccgcatagccggccgt
atcatgagccgccgtgtgatgggtagcgcctcttttatggagctgcaagatgccacgggc
cgtgtgcaggcatacgttaagcgtgacgacatctgtaccggtgaagacaagaccttatat
aatacggtatttaaaaaactgttagacattggtgatattgtaggaatcgaaggatacgtt
tttaccacgcaaacgggtgaaatttcgatccacgtggagactttgcgtattttaacaaaa
tcattacgccctttgcctattgtgaaggaagcagaaggaaaaacatatgacgcattcacc
gatccggagcaacgttaccgtatgcgctatgtagatttaatcgttaatccgcaaaaccgt
gacatctttataaaacgtacccgattgtttaacgctatgcgtgagttttttaacagcgca
gggtatatggaggtagaaacgcctgttttacaatcgatccccggaggtgctgcagcgcga
ccttttatcacgcatcacaatgcgctggacattcccttgtacttgcgcatcgccaacgaa
ctttatttaaagcgtttgatcgtcggtggttttgaaggcgtatacgaattctcgaaaaac
tttcgtaacgagggtatggacagaacacacaatccggagtttaccgccatggaaatttat
gtagcctacaaagactacaactggatgatgaatttcaccgaacgcttgttagagcattgt
gcccttgccgtaaacggcacgacgaaagctacgtttggcgagcatgctatcgactttaaa
gcgccttacaaacgtattaccatggcacagtcgatcttagaatttacgggttttgacatt
actggaaaaacggaggaacaaattcgtgaggctgcaaaaggtatgggtattgctgtaaac
gacaccatgggtaaaggcaaactgattgacgagatcttcggcgagaaatgcgaaggaaac
tatattcagccaacgttcattaccgactacccgatcgagatgtcgccgttaacaaaaaaa
caccgcgacaatccggaactgaccgagcgctttgaactgatggtttgtggtaaggaaata
gccaacgcatattcggagctaaacgaccctatcgatcaacgcgaacgttttgaagatcaa
ctccaactttccgaaaaaggcgacgatgaggccatgtttattgaccaagacttcttacgc
gcactggaatatggtatgccgcctacctcaggcttaggtatcgggatggaccggttgatt
atgttcttaacgaacaacgcatccatccaagaggtattgttcttcccgcaaatgcgcccg
gaaaaagttgctaaagttgcttcggttgatgattatgttgctgaaggtatttctgctgag
tgggttcctgtattgcaaaaaatggggtttacaacgatcgaagccttaaaagaagctaac
ccaaacaaagtatttaacgacttgggtggtatgcgtaaaaaaatgaagctggatattgcc
atgccgaccaaagacgaggttaccaactggtttaattaa
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