Sphingobacterium oryzagri: PQ465_15930
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Entry
PQ465_15930 CDS
T10198
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sop Sphingobacterium oryzagri
Pathway
sop03030
DNA replication
sop03430
Mismatch repair
sop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PQ465_15930 (holA)
03430 Mismatch repair
PQ465_15930 (holA)
03440 Homologous recombination
PQ465_15930 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sop03032
]
PQ465_15930 (holA)
03400 DNA repair and recombination proteins [BR:
sop03400
]
PQ465_15930 (holA)
Enzymes [BR:
sop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PQ465_15930 (holA)
DNA replication proteins [BR:
sop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PQ465_15930 (holA)
DNA repair and recombination proteins [BR:
sop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PQ465_15930 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delta2
DUF1825
Motif
Other DBs
NCBI-ProteinID:
WDF70866
UniProt:
A0ABY7WMN3
LinkDB
All DBs
Position
complement(3907381..3908391)
Genome browser
AA seq
336 aa
AA seq
DB search
MNVSAILTDIKKRKFSPVYLLHGDESYYIDLIADALEKQVLNDAQKGFDQTILYGKDSSI
VNIVNAAKRYPMMSDHQLIVIKEAQDLKWKSEEELLLKYVEHLTPTTILVIAYKYGKFDK
RKKIYKAFEKAGVVVESAKLYDNKVGEWVVDQFRNADRTIHPQAAAMMADYLGTDLSKIA
NEINKLMLNVPKEQEVQPVHIEQNIGISKDFNVFELQSALAKRNAVKAIQIVDYFVANPK
SNPLPMVIGNLGTYFTKILKYHYLPDKSPQVAAKQLGVHSFFLKEYEAAARNFNRKKTFD
IIHQLSAYDLKTKGMDIGPFTDSADILRELVFKILN
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgagtgctattctgacggatattaagaagcgaaagtttagtccggtgtatcta
ctacacggcgacgagtcgtattatatcgacctcatcgccgatgcgctggaaaagcaggta
ttgaatgatgcgcagaaaggttttgaccagaccattctgtatggtaaagatagcagtatc
gtcaatatcgtcaacgctgcaaagcgctacccgatgatgagtgatcatcaacttatcgtt
atcaaggaagcgcaggatctaaaatggaaatccgaagaagagctgctgctaaaatatgtg
gagcacttgacgcctacgaccattttggtcatcgcttacaaatacggcaagtttgataaa
cgtaagaaaatttacaaagcctttgaaaaagcaggcgtcgtggtggaatcagccaagctt
tacgataataaggtcggcgaatgggttgttgatcagtttaggaacgcagaccgcaccatt
cacccacaggcggcagcgatgatggccgattatttaggtacggatctatccaagattgcg
aatgaaatcaataagctgatgctcaatgtgcctaaagagcaggaggttcaacccgtgcat
atcgaacagaatatcggtattagtaaagacttcaatgtttttgagctccagtctgcgctt
gcgaagcgaaatgctgtcaaagccattcagattgtagattatttcgttgccaatcccaaa
tcaaatccgttgcccatggtgatcggtaacttaggcacctattttactaaaatactaaaa
tatcattatttgcctgataagtcgccgcaggtcgcggctaaacagttgggcgtgcacagc
ttttttctcaaggaatacgaggcggctgcacgtaatttcaatcgtaagaaaaccttcgat
attatccatcagcttagtgcttatgatctaaaaacaaaagggatggatatcggccctttt
acagatagtgccgatatcctgcgtgagcttgtttttaagattctaaactaa
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