Sphingobacterium oryzagri: PQ465_16220
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Entry
PQ465_16220 CDS
T10198
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sop Sphingobacterium oryzagri
Pathway
sop03030
DNA replication
sop03430
Mismatch repair
sop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PQ465_16220
03430 Mismatch repair
PQ465_16220
03440 Homologous recombination
PQ465_16220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sop03032
]
PQ465_16220
03400 DNA repair and recombination proteins [BR:
sop03400
]
PQ465_16220
Enzymes [BR:
sop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PQ465_16220
DNA replication proteins [BR:
sop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PQ465_16220
DNA repair and recombination proteins [BR:
sop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PQ465_16220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_22
RuvB_N
RCF1-5-like_lid
AAA_5
AAA_14
Rad17
DNA_pol3_delta_C
AAA_30
AAA_2
AAA_18
AAA_16
AAA_19
PIF1
AAA_24
AAA_33
RNA_helicase
dNK
AAA_7
nSTAND3
AAA_assoc_2
AAA_28
VapE-like_dom
Ig_ZP2_3rd
SAP130_C
AAA_17
Motif
Other DBs
NCBI-ProteinID:
WDF67834
LinkDB
All DBs
Position
complement(3970852..3972669)
Genome browser
AA seq
605 aa
AA seq
DB search
MDNFIVSARKYRPVTFDSVVGQGHITSTLKNAIHNNQLAQAFLFCGPRGVGKTTCARILA
KTINCEHITENVEACGTCDSCISFQNGNSFSIHELDAASNNSVDDIRSLIEQVRIPPQAG
KYKIYIIDEVHMLSQAAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFNRI
KVEAMANHLASIAQKESISFEPDGLHIIAQKADGGLRDALSMFDQIVSFSNKNISYQAVI
DNLNILDYDYYFQLVDRIAGEDGAQTLLIFDKVLNNGFDGGHFISGLATHLRNLLVSKEP
ATLKLLEVSDNIKRKYLEQSQALSSGLLLSTLNIANQCEINYKSSKNQRLQVELALLKMC
HVAAAILLSKQGSFVPSASTEVKKKLPEQSVAAPSTPSVTVSSTPTPAPLTASVPASQAA
VTAVASTTTPPPAAAIAENQSASATPKKGWGKLPSSIDIPNLNTIFEDKPVEESEENDLV
QGNAYSEVTWNAFLSKWNTFAEGLKKTTRVTLYTIMTANVPRLNGTLIEVDVENAVQMDE
LKVGKIDLLNYLRVQLNNFALDIQGVQVEMTKVRKPYTSQEKYQAMLSKNPALETLRKAF
NLGLS
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggataattttattgtttcggcacgtaaatatcgcccggtaaccttcgattcggttgtt
ggtcagggacatattacgagtacgcttaaaaatgccatccacaataaccaattagcgcaa
gcttttttgttttgtggaccgagaggggtgggtaaaacgacctgtgcgcgcattctggct
aaaacaataaattgtgagcatatcactgaaaatgtagaagcttgtggcacctgcgacagc
tgtatatcttttcaaaacggcaattcatttagcatacatgagctcgatgccgcgtctaac
aattcggtagatgatattcgaagtctcattgagcaagtgcgtataccgccacaggccggt
aagtacaagatttatatcattgatgaggtgcatatgctctcgcaggccgcattcaatgct
tttctaaagactttagaagaaccgccttcttacgcgatttttatcttggccacaacagag
aagcacaagattttgccgactattctttcccgttgtcagatttttgattttaaccggatt
aaggtggaagcaatggccaatcatttggcatctattgcgcaaaaagaatcgattagcttt
gagccggatggtttacatattattgcgcaaaaggccgatggcggactgcgcgatgcgctt
tccatgttcgatcaaattgtcagcttttctaacaagaatatttcctatcaggcggttatt
gataacctgaatattctcgattacgattactatttccagttggtggatcgtattgccgga
gaagatggcgcacaaacgttgctgatcttcgataaggtcttgaataacggatttgatggc
ggtcattttatcagcggactggcgacgcatttgcgaaacctgctcgtgtctaaagagccg
gctacattgaaattgctggaagtaagcgataatatcaaacgaaagtatttagaacagtcg
caagccttaagctcgggtttattactgtctacgttgaatattgccaaccaatgtgagatc
aattacaagagtagcaagaaccagcgtttgcaagtcgagctagctttattgaaaatgtgc
cacgtggcggcagcgatactgctcagtaagcaaggaagttttgttccctcagcatcgact
gaggtaaaaaaaaaactccctgagcaatccgtagcagcgccgtctacgcctagcgtaacg
gtctccagcacgccaacaccagcgccgctcacggcgtcggttcccgcaagtcaagctgcc
gtaacggcagtagcatcaactaccacgccgcctcctgcagcagcgatcgctgaaaatcag
tcggcttccgcaacgccgaagaagggttggggaaaactaccttcttccatcgatattcca
aatctcaatacgatttttgaagataaaccggtagaagaatcggaagagaacgatttggtg
caaggtaatgcctacagtgaggtaacctggaatgcttttctttccaaatggaatacgttt
gccgagggcttgaagaaaacaacgcgtgtgacgctatacacgattatgacggctaatgtg
cctcgattgaacggtacactgatcgaagtagacgtggaaaatgccgtgcaaatggacgag
ctaaaggttggtaagattgatctcctcaattatttacgtgtgcagctcaataatttcgca
ctcgatattcaaggtgtgcaggtagaaatgaccaaggtgcgcaagccatacacatcacag
gaaaaataccaggccatgctgtcgaaaaatccggcattagaaacattgagaaaagctttt
aacctcggcctgagttag
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