Sphingobacterium oryzagri: PQ465_16605
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Entry
PQ465_16605 CDS
T10198
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
sop Sphingobacterium oryzagri
Pathway
sop00470
D-Amino acid metabolism
sop00550
Peptidoglycan biosynthesis
sop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sop00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PQ465_16605 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PQ465_16605 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sop01011
]
PQ465_16605 (murD)
Enzymes [BR:
sop01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PQ465_16605 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
sop01011
]
Precursor biosynthesis
Amino acid ligase
PQ465_16605 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
MurD_N
MutL
Pantoate_transf
AlaDh_PNT_C
Nup153
Motif
Other DBs
NCBI-ProteinID:
WDF67910
UniProt:
A0ABY7WEI7
LinkDB
All DBs
Position
complement(4056827..4058200)
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AA seq
457 aa
AA seq
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MANIDPTYYPQSGLLVVLGAGESGVGAAILGKDKGFDVFVSDKGAITDHYKAILQAEGIA
FEELMHTEERLLQAELVVKSPGIPGSVPLVKALKASGIPVISEIEFAAQYTNAKLYCITG
SNGKSTTTMLTYYMMQKAGVNVGLAGNIGQSFALQVARFNYDVYVLEISSFMLDDMYHFR
ADVAVILNITADHLDRYDYKMENYVASKFRMIRNQTAADYFIYCLDDEETSKALPLYETK
AIKLPFTQQEEVAQGAYLDDDKNIIINIPNKEIFTMNIEELSLQGKHNVYNNMASGLVAK
AQELRNQTMKESMGSYVNIEHRLEHVACIGGVNYINDSKATNVNSVWYALESFSPDIILI
MGGVDKGNDYEMLRDLVKAKVKAIVCIGKDTARIHESFEEDTDVIVNSSSMQEAVEMASH
LSKKGDTVLLSPACASFDWFKNYEERGDKFKEAVMAL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatatcgatccaacatattatccgcaatctggacttttggtggtgcttggcgca
ggcgaaagcggtgtgggtgcggctattttaggaaaagataagggttttgatgtattcgtt
tctgataaaggagcgattaccgatcactataaagccattttgcaggcagagggtattgcg
tttgaagagttgatgcatacggaagagcgtcttttacaggctgaactggttgttaaaagt
ccgggcattcccgggagtgtgccgttggtgaaagctttaaaagcctcaggcattccggtg
atttctgaaatagagtttgcggcacaatacaccaatgcaaaattgtattgtattacgggc
tcaaatggtaagtcgacaacaacgatgctgacttattacatgatgcaaaaagcaggcgtt
aatgtcggcttggctggtaacatcggacaaagctttgccctgcaggttgctcgttttaat
tatgatgtatacgtactcgaaatatccagctttatgttggatgatatgtatcattttcgg
gcagatgtcgctgtgatattgaacataacggctgaccatttggatcgttacgactataaa
atggaaaattacgtcgcatcaaagttcaggatgatccgcaatcaaacagcagctgattat
tttatctactgcttagatgatgaggagacctcgaaagcgcttccattatacgaaacaaag
gcaatcaagctgccttttacacaacaagaggaagtagcgcaaggggcttaccttgacgac
gacaagaatattattataaatataccaaacaaagaaattttcacgatgaatattgaagag
ctatcattacagggaaaacacaatgtctataacaacatggcttccggccttgttgctaaa
gcgcaggaattgcgcaatcagacaatgaaggagagcatgggctcatacgtgaatattgaa
catcggctggagcatgtagcttgtattggtggcgtaaattacatcaacgattcaaaagcg
acaaatgtcaattcggtttggtatgcattagagagtttttcgcccgatatcattttgatt
atgggtggagtagataaaggaaacgactacgaaatgcttcgtgatttggtgaaagcaaaa
gtaaaggctatcgtttgtattggtaaagatacagcacgtatccatgaatcttttgaagaa
gatacggatgtcatcgtcaacagttcttctatgcaggaggcggtagaaatggcgtcacac
ttgtcgaaaaaaggtgataccgtattgttgtcgccggcatgtgcaagtttcgactggttc
aaaaattatgaagagcgcggtgataaatttaaggaagcagtaatggctttgtag
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