Sphingobacterium oryzagri: PQ465_16640
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Entry
PQ465_16640 CDS
T10198
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
sop Sphingobacterium oryzagri
Pathway
sop00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PQ465_16640 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sop01007
]
PQ465_16640 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sop03016
]
PQ465_16640 (aspS)
03029 Mitochondrial biogenesis [BR:
sop03029
]
PQ465_16640 (aspS)
Enzymes [BR:
sop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
PQ465_16640 (aspS)
Amino acid related enzymes [BR:
sop01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PQ465_16640 (aspS)
Transfer RNA biogenesis [BR:
sop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PQ465_16640 (aspS)
Prokaryotic type
Other AARSs
PQ465_16640 (aspS)
Mitochondrial biogenesis [BR:
sop03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PQ465_16640 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
WDF67917
UniProt:
A0ABY7WHA3
LinkDB
All DBs
Position
4065366..4067117
Genome browser
AA seq
583 aa
AA seq
DB search
MYRSHSCGELRIADTNKEVTLAGWVQKSRDKGFMVWVDLRDRYGITQLIFDESRTDAAIM
QQAKSLGREFVIQVKGQVIERESKNANMPTGEIEVLVSELELLNESQIPPFTIEDDTDGG
EDIRMKYRYLDIRRNPVKNALLFRHKVTQEVRNYLSSLDFCEVETPYLIKSTPEGARDFV
VPSRMNPGQFYALPQSPQTFKQLLMVAGMDRYFQIVKCFRDEDLRADRQPEFTQIDCEMS
FIEQEDILDVFEGLTRHLLKKIHNLDISKFPRMTFDEAMRKYGNDKPDIRFGMEFGELNA
VTQHKDFAVFNHAELVVGIAVPHAAGYTRKQIDELIEWVKRPQVGATGMVYCKCEADGSF
KSSVDKFYDQEDLAKWAAATGAKAGDLILVLSGPTLKTRTQLSALRMELGNRLGLRKPHE
FAPLWVIDFPLLEWDEESARYHAMHHPFTSPKPEDMHLLDSDPGKVRANAYDLVLNGNEI
GGGSIRIHDKETQALMFKHLGFSTEEAQEQFGFLMNAFQYGAPPHGGLAFGLDRLTAILG
GQETIRDFIAFPKNNAGRDVMIDAPSSIATAQLDELNIGLKNK
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtatagaagtcatagttgcggcgagttgcgtatagccgatacaaacaaagaagtcacg
ctcgcgggatgggtacagaagtctcgtgacaaaggttttatggtatgggtagatttacgt
gatcgctatggcattacacaattgatatttgatgaatcccgcaccgacgctgcgattatg
caacaggctaaatcgttgggtcgtgagtttgtgattcaagtgaagggccaggtaatcgaa
cgagaatcaaaaaatgcaaacatgcctactggtgagattgaagtactggtgagcgaactt
gagcttttgaacgaatcgcaaattccgccttttaccattgaagatgacacggacggtggt
gaagatatccgtatgaaataccgttacttggatatccgtcgtaatccggtaaaaaacgcg
cttttgtttcgccacaaggtgacacaggaagtaagaaactatctttcatcgctcgatttt
tgtgaggtggagacgccttatttaattaaatcgacgccagaaggtgcgcgcgactttgtg
gttccttcgcgcatgaaccctggtcaattttatgctttaccgcaatcgcctcaaacattt
aaacaactgttgatggtagcgggcatggatcgttattttcagatcgtgaaatgctttcgc
gacgaagatttacgtgcagatcgccaaccggaatttacgcagatagactgcgagatgtct
tttatcgagcaggaagatattctggatgtgtttgaaggactgaccagacatttgttaaaa
aagattcataatctcgatatttctaaattcccacgcatgacctttgatgaggcgatgcgt
aaatacggaaacgacaaacctgatattcgcttcggtatggaatttggcgaactgaacgcc
gtaacgcagcataaagactttgccgtatttaaccatgcggaattggttgtcggaattgcc
gttccgcatgctgcgggctatacgcgcaaacaaatcgacgaattgatcgaatgggtaaaa
cggccacaggtgggcgccactggtatggtttactgtaaatgtgaggctgatggttcgttt
aaatcttcggtagacaaattttatgatcaggaggatttggcaaaatgggctgccgcaacc
ggcgcaaaagctggtgatttgatccttgtactttctgggccaacgttaaaaacacgcacg
cagcttagcgcgttacgtatggaattgggcaaccgactaggtttacgtaaaccgcacgag
ttcgcaccactttgggtgattgattttccgctattggaatgggacgaggagagcgctcgc
tatcacgcaatgcaccatccgtttacctcgccaaaaccagaagatatgcatttattagac
agcgatccgggtaaagtgcgtgcgaatgcctatgacctcgtgctaaacggaaatgaaatt
ggcggcggttcgatccgtatacacgataaagaaacgcaggcgttgatgtttaagcatctt
ggtttttctaccgaagaggcgcaggaacaatttggctttttgatgaatgcatttcagtat
ggtgctccgccacatggtggattagccttcggactggatcgcttaacagctattttaggc
ggtcaggaaactatccgtgactttatcgcattcccgaaaaataatgcggggcgcgacgtg
atgattgacgcaccttccagcattgctacagcacagttggatgagctaaatatcggatta
aaaaacaagtag
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