Sphingobacterium oryzagri: PQ465_16650
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Entry
PQ465_16650 CDS
T10198
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sop Sphingobacterium oryzagri
Pathway
sop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PQ465_16650 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sop03400
]
PQ465_16650 (priA)
Enzymes [BR:
sop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PQ465_16650 (priA)
DNA repair and recombination proteins [BR:
sop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PQ465_16650 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
nSTAND3
NUDIX-like
WHD_PriA
Zn_ribbon_6
AAA_33
Motif
Other DBs
NCBI-ProteinID:
WDF70869
UniProt:
A0ABY7WQP4
LinkDB
All DBs
Position
complement(4068933..4071413)
Genome browser
AA seq
826 aa
AA seq
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MSEASLFHHDRETLFVEVILPLYIAKTYTYRVPAEWNEQIAVGKRVIIQFGRNKIYAAIV
YRMVKEAPLQYEAKYILNVIDDDPVVDAHQLALWEWLSAYYMCYLGEVMQAALPAALKMA
SETKIVASEQEGLDRNFLSDKGYMVMEALDVAGELTVNDIVKLLGQKSVFPLLKSLFDHG
YILISEEIKDRFKPKRKSFLRLSKEFGDGEGIRGLLDSLNRAPKQQDAVLAFLQLRKTKA
EIMRQDIMELTAVGAGIIGSLIEKGVFEVDEKVVSRFAGEDLAITTNFVFNAQQQRAFDE
IKGFFEERDVVLLHGVTASGKTQLYIRLIEEAIAAGKNALYLLPEIALTTQITDRLKLHF
GDKLGVYHSKFNDNERAEVWHKVLKGEFKVVVGARSSVFLPFNNLGLIVVDEEHESSYKQ
YDPAPRYHARDTAIYLGHVHQAKVLLGSATPSIESYYNAKAGKYGFVELKERFGEAKLPE
IQVINIAEEGRKDQMFSYFSGALLQGITDALERKEQVILFQNRRGHTPFVQCSTCGWVAK
CVNCDVSLTYHKSSNHLHCHYCGHMEPPIQVCPACGMPHIESKGFGTERVEEELELLLPA
ARIGRLDLDSTKGKYGFDKVITAFDDHEFDVLIGTQMVAKGLDFGRVSLIGIINADAMIN
FPDFRAYERAFSLFSQVAGRAGRREKEGRVIVQTHTPNHRVLEQVIEHNYEGMFMTEVKE
RKNYQYPPFYRLIKMDIRHTDMQYAHDGASRLASLLRANLGSRVLGPEPPLISRVRNHFI
QTITLKIERNNVSIAKVKEFIRQAIVQFEIDKSNKGIRISIDVDPY
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagcctctttatttcatcatgaccgcgaaaccctatttgtggaggttattttg
ccgttgtacattgcaaagacgtacacgtatcgtgtgcctgcagagtggaacgaacaaata
gcggtgggtaaacgtgtgattatacaatttggtcgtaataaaatatacgccgctattgta
taccgtatggtaaaagaagcaccattgcaatatgaagctaagtatatcctgaacgttatt
gatgatgatccggtcgttgatgcacatcagttggcgctatgggaatggttgtcggcttat
tacatgtgctatttgggcgaagtaatgcaggcagcactcccggcggcgttaaaaatggcg
agcgagactaaaattgtcgcttccgaacaggaaggattggatcgcaacttcttgtcagac
aaaggttacatggtcatggaagcgctcgatgtagcgggcgagcttaccgtaaacgatata
gtgaagttgttggggcagaaaagcgtttttccgcttttaaagtcgctatttgatcacggc
tacattttgatatccgaagagatcaaagatcgttttaagccaaagcgtaagtcttttctg
cggttgtccaaagaatttggcgatggcgaaggtatacgcggcttgctggattcgctcaac
agagcgccaaagcagcaagatgctgtgttggcgtttctgcaattgcgaaagaccaaggca
gaaatcatgcggcaagatatcatggaactaactgcggtcggtgccggtatcataggttca
ttgatagaaaaaggcgtttttgaagtagacgaaaaggttgtgtctcgatttgctggggaa
gatctggcaataacgacaaactttgtgtttaatgcgcagcagcagcgagcctttgacgag
attaaaggttttttcgaggagcgagatgtggtgttgctgcatggcgtaacagcatcgggt
aaaacacagctctacatccggctgatcgaagaggccatagcagcgggcaaaaatgcgctt
taccttttgcccgagattgcgttgaccacgcagataaccgatcggctaaaattgcatttt
ggcgataaactgggcgtgtatcactccaaatttaatgacaatgagcgggcggaggtttgg
cacaaagtgctgaaaggcgaatttaaggttgttgtaggtgcgcgttcatcggtgtttttg
ccgtttaacaatttgggattgattgtggtcgatgaggaacacgaaagttcgtataaacaa
tatgatccggcaccgcgttatcacgcgcgtgatacggcgatttacctcggtcacgtccac
caggcaaaagtattgcttgggtcggctacaccttctatagaaagttattacaacgcaaaa
gctggtaaatatggtttcgtcgaacttaaagagcgttttggtgaagctaagcttcctgaa
attcaggtaatcaatattgcggaggaaggacgtaaagaccaaatgttttcctatttcagt
ggcgcgctattgcaaggtatcaccgatgctttggaacgtaaagaacaggtaattcttttt
caaaatagacgtggacatacgccttttgtgcaatgtagcacgtgtggttgggtcgcgaaa
tgcgtcaattgtgatgtcagcctgacttatcacaaatcgagcaatcacttgcattgtcat
tattgcggccatatggagccgcctattcaggtttgcccagcttgcggtatgccacatatc
gaaagcaaaggtttcggaacggaacgcgtggaggaagaattagaacttttgttgcctgcg
gcacgtattggtcggttggatctggactcgacaaaaggaaagtatggtttcgataaagtg
atcacggcttttgacgatcatgaatttgatgtgctcatcggtacgcagatggtcgcaaaa
ggacttgattttggtcgagtaagcctgatcggcattattaatgccgacgcgatgattaac
tttccggattttcgtgcctacgaacgggctttctccttgttttcgcaagtggctggtcgc
gccggtcgacgtgagaaagaagggcgagttatcgtgcaaacgcatacgccaaaccatcgt
gtgttagaacaggtgattgaacataattacgaaggcatgttcatgacggaggttaaggag
cgtaaaaactatcaatatccaccgttttatcgattaataaaaatggatattcggcatact
gatatgcaatacgcacatgatggcgcgtcacgcctagctagtcttttacgcgctaatctc
ggaagtcgggtgttaggccctgagccaccgcttatttcgcgcgttcgcaatcattttatc
caaacgattacactcaagattgaacgtaacaatgttagtattgcaaaagtaaaggagttt
atacggcaagcaattgtgcagtttgaaatagataaatcaaataaaggaatccgtatttcg
attgatgtcgacccgtattag
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