Sphingobacterium oryzagri: PQ465_18205
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Entry
PQ465_18205 CDS
T10198
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sop Sphingobacterium oryzagri
Brite
KEGG Orthology (KO) [BR:
sop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sop03016
]
PQ465_18205
Enzymes [BR:
sop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
PQ465_18205
Transfer RNA biogenesis [BR:
sop03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PQ465_18205
Prokaryotic type
PQ465_18205
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_4
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
WDF68219
UniProt:
A0ABY7WLL4
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All DBs
Position
complement(4459936..4460850)
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AA seq
304 aa
AA seq
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MSRFEVLILGNSSATPMYGRHPTSQVLNFNEQLFLIDCGEGTQMQLFRYGIRSTKINHIF
ISHLHGDHYLGLVGLLSSQHLVGRQADLHLYGPAPLKEILDLQFKHSDTRLRYALIFHPT
NESQAELILDTPMLRVTSFPLRHRIACTGFRFDEGKRAASLKADAIERLQIPTAYLKLLK
KGIDYVAKDGTVFPASELTTPPPPARSYAYCSDTVLSPDYLPYIADVDLLYHESTFMHDM
VDRAKETFHTTSLEAGEVAKTMGAKKLLLGHYSARYKDLQPLLQESRTVFSNTELSEEGK
WFLV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtctagatttgaggtgttgattttgggaaatagttcggccacgccgatgtatggtaga
catccaacatcgcaggtgctgaattttaatgagcagcttttccttatcgattgcggtgaa
ggaacgcagatgcagcttttccgctacggtattcgtagcaccaaaatcaaccatattttt
atcagccatttacatggtgatcattacctgggtttggtcggtctgctatcttctcaacac
ctcgtaggccggcaggcagatttgcacctgtatgggccggcaccgttaaaggagatttta
gatttgcagtttaagcattcggatacgcggctgcgttatgcattgatctttcatccgacg
aatgaaagccaggctgagctgattttggacacgcctatgttaagagttaccagctttccg
ttacggcatcggatagcttgcacgggctttcgctttgatgaagggaagcgtgctgcgagc
ttgaaagctgatgcgatcgaacgcctgcaaatcccgaccgcctatttgaaattattgaaa
aaagggattgattatgttgccaaagacggcaccgtatttccggccagcgagctgacgaca
ccgccgccgcctgcacgaagctacgcgtactgctcggataccgtattgtctcccgattat
ttaccctatatcgcggatgtcgacctgctataccacgaatccacgtttatgcacgatatg
gtcgatcgtgcaaaagaaacatttcacaccaccagcctcgaagcgggagaggtcgctaaa
accatgggcgcaaagaagctgttattaggtcattactctgcccgatacaaagatttgcaa
ccacttcttcaagaatcgcgtacggttttttccaataccgagctctcggaagaaggtaag
tggtttttagtatag
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