Sphingobacterium oryzagri: PQ465_20785
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Entry
PQ465_20785 CDS
T10198
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
sop Sphingobacterium oryzagri
Pathway
sop00260
Glycine, serine and threonine metabolism
sop00630
Glyoxylate and dicarboxylate metabolism
sop00670
One carbon pool by folate
sop00785
Lipoic acid metabolism
sop01100
Metabolic pathways
sop01110
Biosynthesis of secondary metabolites
sop01200
Carbon metabolism
Module
sop_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PQ465_20785 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PQ465_20785 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PQ465_20785 (gcvP)
00670 One carbon pool by folate
PQ465_20785 (gcvP)
Enzymes [BR:
sop01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
PQ465_20785 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
WDF68718
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All DBs
Position
complement(5098651..5101524)
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AA seq
957 aa
AA seq
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MSNVFYQERFQDRHNGPRAEEVQEMLAFLGVQSVDELIEQTVPHQIRLKKPLALPEALSE
KAYLAKVKQLADKNKVFKSYIGQGYYDVTVPGVIQRNVLENPGWYTQYTPYQAEIAQGRL
QALLNFQTAVADLTGLEIANASLLDEATAAAEAMFMLYSARKVKDANVFLVTPNVYPQTL
DVLQTRATPFGIEIRVADLEDASLTEDVFAAFIQYPAADGSLTDYAGFTASAHAKNITIC
VAADLLSLTLLTPPGEWGADVVVGNSQRFGVPMGFGGPHAAFFATKDAYKRNIPGRIIGV
TSDANGDYALRMALQTREQHIRRDKASSNICTAQALLAIMASFYAVYHGPQGIKNIATRI
NDLAKLLDHALQALGYTQTNASYFDTLRVVVGDQVGALKGEALNNELNFFYHEGIVGIAI
DETTTFEDIQTIVKVFAKIKAKSLNDVDLHGLADQLSSSIPDALVRTSAYLTHPIFNSYH
SESEMLRYIKSLESKDLSLCHSMIPLGSCTMKLNATTEMVPLTWAHFGGLHPFAPVDQTS
GYMQLINELNDWLSEITGFAKMSFQPNSGAQGEYAGLMVIRAYHESRGESHRNICLIPAS
AHGTNPASASMAGLKVVVVKCDAFGNIDVADLRARAEEHAANLNSLMVTYPSTHGVFEES
IIEICEIIHANGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGP
IGVVAHLVPFLPNHEVIEISGEQGISAVSAAPFGSASILTISYAYIAMMGADGLTAATKT
AILNANYIKARLEGHYAVLYAGANGRCAHEMILDCRGFKNVGIEVADIAKRLMDYGFHAP
TVSFPVAGTLMVEPTESESKAELDRFCDALIAIRAEIAAVEAGEADQKENVLKHAPHTAE
VVTADEWNRAYSRQTAAYPLPYLKVNKFWPSVGRVNDSQGDRTLICSCPSIEEYAEA
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgtattttatcaagaaagatttcaagatcgccacaatggcccacgggcagaa
gaggtgcaagaaatgttagccttcctaggcgtacaatcggtagatgaacttatcgagcaa
accgttccccatcaaattcgactgaaaaagccgcttgcccttccagaggcattgagcgaa
aaagcttatttagcgaaggtaaaacagcttgctgataaaaacaaagtgtttaaatcgtat
atcggacaaggatattatgatgtgactgtaccgggggttatccagcggaatgtattggaa
aatccaggttggtatacgcaatatacgccttatcaggccgagatcgcgcaaggtcgtttg
caagccttgttaaatttccaaacagccgtggctgatcttacgggcttggagattgcgaat
gcttccttgctggatgaggcaacagcagcggctgaagccatgtttatgttgtatagcgca
cgcaaagtaaaggacgcgaatgtatttttggtcacgcctaatgtttatccgcaaacgcta
gatgtattgcagacgcgcgcaacaccttttggtattgaaatccgtgtagcagatttagag
gatgcaagcttaaccgaagacgtttttgctgcgtttattcagtatccggcagcagatggt
tcgctgacggattacgctggctttacggcttcggcacatgctaaaaatatcactatttgc
gtggcagcagatctgctttcgttaacgttattgacgcctccgggcgagtggggtgccgac
gttgtggttggtaattcacaacgttttggcgtgccgatgggttttggtggcccgcacgct
gctttctttgccacaaaagatgcctacaaacgtaatattccaggtcgtatcatcggtgta
acatcagatgcgaacggcgattatgccttacgcatggctttacaaacgcgcgagcagcac
atccgtcgggataaagcttcttccaatatttgtacggcacaagcgcttttagcgattatg
gcctctttctacgcggtataccatggcccgcaaggcataaaaaatatcgctactcgtatc
aatgatttagcaaaattattggatcatgcgctacaagcgttaggttatacgcaaaccaac
gcttcttacttcgatacgttgcgtgtcgttgttggcgatcaagtcggcgcgctaaaaggg
gaagccttaaataatgaattaaacttcttttatcatgagggaattgtggggatcgcgatt
gacgagaccacgactttcgaagatatccaaaccattgtgaaggtttttgccaaaattaag
gcgaaatcattgaacgatgtggatttgcacggtttggcagatcagttgtcgagctctatt
ccagacgcgttagtgcgtacatcggcttacttgacacatcctattttcaatagctaccat
tccgaaagtgaaatgttgcgctatatcaaatcgttagaatcgaaagatctttcgctatgc
cactccatgattccgttgggctcttgtacgatgaagcttaacgcaacaacagagatggtg
ccattgacttgggcgcattttggtggtttgcatccttttgctccggtagatcaaacttcg
ggctatatgcagcttatcaacgagttgaatgactggttgtctgaaatcacgggctttgcc
aagatgtctttccagccaaactcaggtgcccagggcgagtacgccggacttatggttatt
cgtgcgtatcacgagagtcgcggcgagtcgcatcgtaacatttgtttgattcctgcttcg
gcacacggtactaacccagcttcagcttctatggccggcttaaaagtggtggtcgtgaag
tgtgatgcttttggtaatattgatgttgccgatcttcgcgcaagagccgaagagcatgct
gcaaacttgaactcgttgatggttacatatccatctacgcacggtgttttcgaggaatct
attatcgagatttgtgaaattatacatgccaacggcggtcaggtctatatggacggcgcg
aatatgaatgcgcaggttggtttaacaagtccgggctttattggtgcggatgtttgtcac
ttaaacttgcacaagacgttttgtattccacacggtggtggtggcccaggtatgggtcct
attggtgtggtagcgcatttagtgccgtttttaccaaatcatgaggtaattgagatttcg
ggcgaacagggaatttctgcagtgtctgcagcgccttttggatcggcgtcaatcttaacg
atttcttacgcttatatcgcgatgatgggtgctgatggcttaacagcagcaacgaaaacc
gcgatcttaaatgcaaactatatcaaagcgcggctggaggggcattatgcagtcctttat
gcgggcgcaaacggacgttgtgcgcacgaaatgatcttggattgccgcggatttaaaaac
gtgggtatcgaggtggcagatattgccaagcgtttgatggactacggtttccacgcgcca
acggtttctttcccggtagcgggcacgttgatggtggagccgaccgagtcggaatcaaaa
gcagagcttgatcgtttttgtgatgctttaatcgctattcgtgcagagattgctgcggta
gaggctggcgaagctgatcaaaaagagaatgtattgaaacatgcgccgcatacggcggaa
gtggttacggcagatgaatggaacagagcctatagcagacaaacggcggcatatccactt
ccgtatttgaaagtgaataagttttggccttcggtgggtcgtgtaaatgattcgcaggga
gaccggacattaatttgttcttgcccgtctatcgaagaatatgcagaggcttaa
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