Sphingobacterium oryzagri: PQ465_20840
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Entry
PQ465_20840 CDS
T10198
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
sop Sphingobacterium oryzagri
Pathway
sop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PQ465_20840 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sop03400
]
PQ465_20840 (recO)
DNA repair and recombination proteins [BR:
sop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PQ465_20840 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PQ465_20840 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
WDF68729
UniProt:
A0ABY7WN16
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All DBs
Position
5110144..5110869
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AA seq
241 aa
AA seq
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MLHKTKGIALKITSYAENSIVAHVFTEAFGMQAYLINGAKKPKASISANLFQPLYPLDMV
VYHKDSNGLQRMKEAHQVPVLREIPFDMTKGALALFINEILYKALRQQSPDPFLFNFIQQ
AILWLDNAESGLANFHLVFLVKLSRFLGFLPLHSNKGSHPYFDLLDGVFGNSLPAHRHVL
QEPHTSLFHQLLRISFEESSTIKMPKDDRKYLLEKTLEFYKLHTENFGSVHSLYILEEIF
Q
NT seq
726 nt
NT seq
+upstream
nt +downstream
nt
atgttgcataaaaccaaaggtatcgctttaaagataacgagctacgcagaaaatagcatc
gttgcacatgtttttaccgaagcttttggcatgcaggcttaccttatcaatggcgcaaaa
aaaccgaaagctagtatatcggccaatctatttcagccgctctacccgctagatatggtg
gtataccataaagacagcaacggactgcaacgcatgaaagaggcgcaccaagttccggtg
ctacgcgaaataccttttgacatgaccaagggcgcactcgcgctgtttatcaatgaaatt
ttgtacaaagccttgcgccagcaatcaccggatccatttctgtttaactttattcagcaa
gctattttatggttggataatgcagagagtgggctggccaactttcacttggtctttctg
gttaagctaagccgatttctcggcttcctgccgttgcatagcaacaaaggctcccatccg
tactttgatttgttagatggcgtttttggcaacagcctgcccgcacatcgccacgtattg
caggaaccacacaccagcctttttcatcaattgctacggattagctttgaagaatcatcg
accatcaagatgccgaaagacgacagaaaatacctgttagaaaaaacgctggaattttac
aaactgcacacggaaaacttcggaagtgtgcattcgctctacattttagaggaaattttt
caataa
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