Sphingobacterium oryzagri: PQ465_21010
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Entry
PQ465_21010 CDS
T10198
Name
(GenBank) DNA polymerase III subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
sop Sphingobacterium oryzagri
Pathway
sop03030
DNA replication
sop03430
Mismatch repair
sop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PQ465_21010
03430 Mismatch repair
PQ465_21010
03440 Homologous recombination
PQ465_21010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sop03032
]
PQ465_21010
03400 DNA repair and recombination proteins [BR:
sop03400
]
PQ465_21010
Enzymes [BR:
sop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PQ465_21010
DNA replication proteins [BR:
sop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PQ465_21010
DNA repair and recombination proteins [BR:
sop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PQ465_21010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
FeoB_associated
Motif
Other DBs
NCBI-ProteinID:
WDF68762
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All DBs
Position
5142917..5144059
Genome browser
AA seq
380 aa
AA seq
DB search
MQFKDIIGHDQVKEHLLHTVKDNRVSHAQLFLGPEGSGSLALAVAYAQYINCENKQDNDS
CGVCSSCNKYQKLIHPDLHFSYPFFAKGKDEVAVTYLDEWRKAFLANPYMGLDFWRHHLD
AENKQANINIAEAHDIIKKLSLKAFEAEYKVLIMWLPEFLDVQGNALLKLIEEPPAKTLF
LLVAENQDRILNTIISRTQLVKVFKLNHSQVRDYLIDVKKVDGQRANALSFIADGNLQMA
LNLLEEDENPFFDTLLHWLRFVVTDAGLHIIRYCEEDFPKLGRENQKNFLLYAINMLRQI
VLIQQGLQQLVLLQGAELDFVQKFSENFRSEQLEIAIDLLEKTHYKVERNANPKILFLDL
SLQLVLIFKYQTFPQGTQYI
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttaaagatatcattggacacgatcaagtaaaggaacatttgctccacacggtt
aaagataaccgggttagccatgcgcaactttttttgggtccggagggttcgggcagcttg
gcgctggccgtagcctatgctcaatatatcaactgtgaaaacaaacaggataacgacagt
tgtggcgtgtgtagctcgtgcaataaataccaaaaacttatccatcccgatttacatttt
tcgtatcccttttttgcaaagggaaaagatgaagtcgcagtgacgtatcttgacgaatgg
cgaaaggcctttctggctaatccgtatatgggcttagacttttggcggcatcatctcgac
gccgaaaacaagcaggccaacatcaatattgcagaggcgcatgatattatcaaaaagctt
agtttgaaagcttttgaagcggaatataaggtattgatcatgtggcttccggagtttctg
gacgtgcaagggaatgccctgttaaagcttattgaagaacccccggcaaagacactcttt
ctgctggttgctgaaaatcaagatcgaattttgaacaccattatctcgcgtacgcagctg
gtcaaagtttttaaactcaaccacagccaggtaagggattatcttattgatgtaaaaaag
gtagatgggcaacgcgcgaatgcactttcgtttattgcagacggtaatctgcaaatggca
ttgaacctgctggaagaagacgaaaaccctttttttgatacgcttttgcactggctacgc
tttgtggtgacagatgccggcttacacatcattcggtattgtgaggaagactttccaaag
ctaggacgggaaaatcagaaaaatttcttactttatgccattaatatgttgcgccaaatt
gtattgatccaacaaggattgcagcaactggtgctattacaaggtgctgagttagatttt
gtgcagaaatttagtgagaattttcggagcgaacagctggaaatcgcgatcgatctgctg
gaaaaaacacactacaaagtagaacgcaatgcaaatcctaaaattttatttttagattta
tctttgcaattagttttaatatttaaatatcaaacgttcccacaagggactcaatatata
taa
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