Spirosoma oryzicola: LQ777_00035
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Entry
LQ777_00035 CDS
T08981
Name
(GenBank) hypothetical protein
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
soq
Spirosoma oryzicola
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soq03019
]
LQ777_00035
03016 Transfer RNA biogenesis [BR:
soq03016
]
LQ777_00035
Enzymes [BR:
soq01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
LQ777_00035
Messenger RNA biogenesis [BR:
soq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LQ777_00035
Transfer RNA biogenesis [BR:
soq03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LQ777_00035
Prokaryotic type
LQ777_00035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
Motif
Other DBs
NCBI-ProteinID:
UHG91311
LinkDB
All DBs
Position
3899..4141
Genome browser
AA seq
80 aa
AA seq
DB search
MDYVRRYGRAPDGYVGGRTFGNYEGHLPKQDNSGDRVRYREWDVNPKIQGRNRGTERLIT
GSDERAYFTQDHYNSFTEIK
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
ttggactacgttcgccggtatggccgggcacccgatggctacgtaggtggtcgaaccttt
ggtaattacgaaggccacctgcccaaacaggataattcgggcgatcgtgtccgttatcgg
gagtgggacgttaaccctaaaattcagggtcgtaaccgaggcactgaacggttgatcacg
ggttccgacgagcgggcgtatttcacccaagaccattacaactcatttaccgaaatcaaa
tga
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