Spirosoma oryzicola: LQ777_00640
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Entry
LQ777_00640 CDS
T08981
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
soq
Spirosoma oryzicola
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soq03400
]
LQ777_00640
DNA repair and recombination proteins [BR:
soq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LQ777_00640
Archaeal homologous recombinant proteins
LQ777_00640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
UHG91423
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All DBs
Position
complement(163187..164413)
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AA seq
408 aa
AA seq
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MKIIHTADWHLGKRLQDFQRLQEQQTVLDEIIELVEREQADLVLVAGDLFDSFNPNPKAE
DLLYSTLKKLTAGGKRPVVVIAGNHDNPYRIEAQDHFGRECGIVFAGFPKTEVHSYELSC
QAKLLRSAPGFVELKLPGHEAPVRIILTPYANESRMRSYFGQTSFGDELRQQLQQHWAGL
ADTYMDDQGVNLLTAHLFVMKRGGEQPEESDDERSILQVGGASVVYTDMIPPQVQYTALG
HLHRYQEIGGGPSPVIYSSSPLAYSFAEADQQKYVVLIDAEAGQPVTVTPLPLTSGKRLL
RPRFTHVVDAVEWLQQNPDCYPEITMQTATYLTSEERRQLQQAHTSLVTIIPDVRDVEMP
EQESVPTIDLTKSMNTLFTDYFKSKNKGQEPNERLQQLFKEILATESE
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattatacacacagcggactggcatctaggaaaacggctccaggattttcaacga
ctccaggagcagcagactgtattggatgagattattgaactggtcgagcgggaacaagcc
gatttggtacttgtagcgggtgacttgtttgattcatttaatcccaatcccaaagccgag
gacttattatatagtacgcttaagaaattgacggcaggtggtaagcgtcctgtagtcgtg
attgccggaaatcatgacaatccatatcgaatagaagcacaagatcattttgggcgcgaa
tgtggtattgttttcgccggttttccgaaaacagaggttcattcgtacgaattgagttgt
caggcgaaattgttacgctcagctcctggctttgttgaactgaagctacctggtcacgaa
gcgccggtacgaatcattcttacgccttatgccaatgaaagccggatgcgttcgtatttc
ggacagacaagttttggtgatgaacttcggcagcagttgcagcaacactgggcaggacta
gcggatacttatatggatgatcagggcgtcaatctgctaaccgctcatttgttcgttatg
aaacgcgggggcgagcaacccgaggaatcggacgatgagcgtagtattttgcaggttggc
ggagcctccgttgtttacacggacatgattcctccgcaagtgcagtatacagcgttgggc
catttacatcgttatcaggagataggtggaggacccagtccggttatctatagtagcagt
ccgctagcgtacagttttgcggaagccgaccagcagaagtatgttgtgctcattgacgct
gaagcggggcaacccgtaacggttacgccgttacccctcaccagtggtaagcggctttta
cgtcctcgattcacacacgtcgttgatgccgttgaatggcttcaacaaaatccggattgc
tatccagagattacgatgcaaacagcaacgtatctaaccagtgaagagcgccgacagctt
cagcaggctcacacgtcgttggtgacgattattcccgatgttcgtgatgtagagatgccc
gagcaggaaagcgtaccaacgatagaccttaccaaaagtatgaatacgctcttcacggat
tacttcaaaagcaaaaacaaagggcaggaaccgaatgagcggcttcagcaattgtttaaa
gaaattttagccaccgaatccgaatga
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