Spirosoma oryzicola: LQ777_01590
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Entry
LQ777_01590 CDS
T08981
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
soq
Spirosoma oryzicola
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soq02000
]
LQ777_01590
Transporters [BR:
soq02000
]
Other transporters
Pores ion channels [TC:
1
]
LQ777_01590
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GFIT
Motif
Pfam:
OmpA
PD40
DUF748
CarboxypepD_reg
Glyco_hydro_43
Fn3_arc
Motif
Other DBs
NCBI-ProteinID:
UHG91603
LinkDB
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Position
387091..388746
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AA seq
551 aa
AA seq
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MNANGIVVASLFFSIASLAAFAQPGDPAQRQDSTKTASASDTKVENLGSQVNSEYNEINP
MISPDGKTLYFARISHPNNTHGTKGSQDIWYSELDGASGKWGPARRMGFPLNKDEYNCAY
SITPDGNSMLIKGQYANGNYETRGFSTSKRTASGWSVPQKLDIPSYVNMSKGQFDCGFMS
ADGKVLLMAFSEKKNSKDDDIYVSFRQKDGSWTKPMELGPEVNTKFTETTPFLAPDGATL
YFSSNREGGLGSNDIYVCKRVDKTWKHWTKPVNLGPKVNTEGYDAYYTLAASGDYAYLTT
FKNTLGKGDIVRVKLTEDQPTNQPGRLGGSDDVAGKGDVTRPDPVALISGKVIDQKTGKP
VEARIVYQTLPDGAEAGEATSDPVTGEYKIVLPYGQKYSMRAIAKDFIAEGDNVDLTQTK
GFQEIKGKELKLVPIEEGRAIRLNNIFFDTGKSELRPESGPELDRLVTTLNETPKMIIEV
RGHTDNTGSNEINAKLSQDRADAVREYFISKGIEPDRVGSKGFGEAKPVAPNDTDEGRQK
NRRVEFVIVKK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccaacggtatcgttgtcgccagtttgtttttttcaatagcatccctggctgct
ttcgcgcagccaggcgaccctgcgcagcggcaagactcgaccaaaactgccagtgcatcg
gacacaaaagttgaaaacttgggtagccaggtcaattcggaatacaacgagatcaacccg
atgatttcgccggatggcaaaacgctgtactttgcccggataagccatcccaacaatacg
cacggaaccaaaggcagtcaggatatctggtattcggaactcgatggggccagcggtaaa
tggggacccgcccggcgcatgggctttccgctgaataaggatgaatataactgtgcctac
agcattacgcccgatggcaattcgatgctgatcaagggacagtatgccaatggaaactac
gaaacgcgcggtttttcgaccagtaaacgcacggccagcggttggtccgttccgcaaaag
ctcgatataccgagctacgtgaacatgagcaagggacagttcgactgtggcttcatgtct
gcggatggtaaggtgctgctgatggcgttcagcgaaaagaagaacagcaaagacgacgat
atctacgtcagctttcggcaaaaggacggctcctggacgaagccgatggagcttggcccg
gaagtaaatacaaagtttacggaaacgaccccatttctggctcccgacggggccacgctt
tatttttccagtaaccgcgaagggggactgggtagtaatgacatttacgtttgtaagcgc
gtagacaaaacctggaaacactggacgaaacctgttaatctgggccccaaagtcaatacc
gaaggctatgacgcgtattacacgctggctgcttcgggcgattatgcttatctgaccacc
ttcaagaatacgctcggcaaaggcgacatcgtgcgggtgaagctgactgaggatcaacca
accaaccagccggggcgattgggcggtagtgacgatgtggctggcaagggtgatgtaacg
cgtcccgatccagtagcgctaatcagcggaaaagtaattgaccagaaaaccggtaagccc
gttgaagcccgaattgtgtaccagacgctccccgatggagccgaagcgggtgaggctacg
tcggacccggttacgggtgagtacaagatcgtgcttccctacggccagaaatacagcatg
cgggctatcgccaaagattttattgcggaaggcgacaacgtggatttgacccagacgaag
ggttttcaggaaattaaagggaaagaactgaagctggtgcctatcgaagaaggacgagcg
attcggttgaataacatcttctttgatacgggcaaatcggagcttcgtccggaatccggt
cctgaacttgatcgtctggtgacaacgttgaacgaaacaccgaaaatgatcatcgaagtg
cgtggtcacaccgacaatacaggctcaaacgaaataaacgcaaagctgtcgcaggaccgg
gccgacgctgttcgtgagtattttatcagcaaaggcattgagccggatcgggttggtagc
aaagggtttggagaagccaagcccgtcgcaccaaacgacacagacgaagggcggcagaag
aaccgacgcgtagaatttgtaatcgtgaaaaaatag
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