Spirosoma oryzicola: LQ777_01705
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Entry
LQ777_01705 CDS
T08981
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
soq
Spirosoma oryzicola
Pathway
soq00061
Fatty acid biosynthesis
soq00071
Fatty acid degradation
soq01100
Metabolic pathways
soq01212
Fatty acid metabolism
soq02024
Quorum sensing
soq04146
Peroxisome
Module
soq_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LQ777_01705
00071 Fatty acid degradation
LQ777_01705
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LQ777_01705
09145 Cellular community - prokaryotes
02024 Quorum sensing
LQ777_01705
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
soq01004
]
LQ777_01705
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
soq04147
]
LQ777_01705
Enzymes [BR:
soq01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LQ777_01705
Lipid biosynthesis proteins [BR:
soq01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LQ777_01705
Exosome [BR:
soq04147
]
Exosomal proteins
Exosomal proteins of breast milk
LQ777_01705
Exosomal proteins of breast cancer cells
LQ777_01705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
UHG91625
LinkDB
All DBs
Position
complement(412745..414451)
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AA seq
568 aa
AA seq
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MDTPTTNQTYPWLRFYPKGVPHEINPDAYPSLAALIEEGCQRFSDRPAYACMGKQITYGE
LDRLSKQFASFLQHDLGLKKGDRLAIQMPNVLQYPIAMFGALRAGLAVVNTNPLYTPREM
QHQFKDSGAKAVVIVANFAANLEKILDKTDIQHVIVTQLGDLLGFPKKQIVNAVVNYVKK
LVPPYKLPNAISFNDALSRGSRHSFQPVDIKSSDLAFVQYTGGTTGVSKGAMLTQRNMIA
NVEGQHAWIRPAGIPEGQGIFVAALPLYHVYALTTNALSALRSGCMNLLITNPRDLNAFI
DDLKKYKVSAFTGVNTLYNGLLNHPRIGEVDFSGLRVTSAGGMALQTSVAERWAKLTGNT
PCEGYGLTETSPVLSSNPVGEGIRVGTIGIPWPSTQMKIIREDGTDAPLGEAGEIAAFGP
QVFTGYYNRPEETAQVMLGNWFKTGDIGVMNEDGYFKIVDRKKDMILVSGFNVYPNEIED
VVSQCPGVLEVACIGVPNEKSTEIVKVFVVKKDPALTDETIKAFCRENLTPYKIPKLIEF
RTELPKSNVGKILRRPLRDEELAKIKGK
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggacacgcccacaacgaatcagacatatccttggctacgcttttatcccaaaggtgtt
ccccacgaaataaatccggatgcttacccgtctctggcagctttgatcgaggaaggttgt
caacgattcagtgatcgacccgcttacgcctgcatgggtaagcagatcacgtatggcgag
ctggaccgtctttcaaaacagtttgcgtcctttttacagcatgatctgggtcttaaaaaa
ggagatcggctggccattcagatgccaaacgttttgcaatatccaattgccatgtttggg
gcgttacgcgctgggctggcagtagttaacacgaatcctttgtacaccccgcgtgaaatg
cagcaccagtttaaggattctggtgccaaggccgttgtgattgtggcgaactttgcggcc
aacctggaaaagattctcgataaaaccgacattcagcacgtcattgtaacacaactaggc
gacttgctgggctttcccaaaaagcaaattgtcaatgcggttgtcaactacgttaagaag
ctggttcccccgtataaactgcccaatgccatttcgttcaacgatgcgctgagccggggc
agtcgtcacagcttccagcctgtggatattaaaagcagcgacctcgcctttgttcagtac
acgggaggaaccacgggcgtttcaaaaggggctatgctcacgcagcgaaatatgattgcc
aatgtcgagggtcagcacgcctggattcgaccggcgggcataccagaaggccaaggcatt
tttgtggccgccttacccctctaccatgtctacgccctgacgacgaatgcgctatcggcg
ctgagaagcggttgcatgaacttgctgatcacgaacccgcgtgatctcaacgcctttatc
gacgatctgaaaaaatacaaggtatcggctttcaccggtgttaacaccctttacaatgga
cttttgaaccacccccgaatcggcgaagtcgattttagtggtttgcgagtaacctcggcg
ggcggtatggctttacagacatccgtagccgaacggtgggccaaacttacgggtaatacc
ccctgcgaaggttacggacttaccgaaacttctcctgtattatcgtctaatcctgtaggt
gaggggatccgcgttggaacgattggtattccgtggcccagcacccaaatgaaaatcatt
cgtgaagacggtaccgatgcacccctgggcgaagctggtgaaattgccgctttcggccct
caagtatttacgggctactacaaccgtcccgaagagacggctcaggttatgttaggaaac
tggttcaaaacgggagacattggcgtaatgaacgaagacggttatttcaaaatcgttgac
cgtaaaaaagacatgattctggtatcaggtttcaatgtctacccgaacgaaatcgaagat
gtcgtttcgcagtgccccggcgttcttgaagttgcctgcattggcgttcccaacgagaag
tcgaccgagattgttaaggtttttgtggtgaagaaggaccccgccttgacagatgagacc
atcaaagctttctgccgcgaaaatctgacgccttataaaattccaaaattgatcgagttt
cgaaccgaattgcctaagtcgaacgtgggcaaaattctgcgccggccgctacgggatgaa
gagctagcaaaaataaaaggtaaatag
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