KEGG   Spirosoma oryzicola: LQ777_02685
Entry
LQ777_02685       CDS       T08981                                 
Name
(GenBank) WD40 repeat domain-containing protein
Organism
soq  Spirosoma oryzicola
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WDR55 WD40_WDHD1_1st WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_2nd WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_HPS5 WDR54 Beta-prop_NUP159_NUP214 Beta-prop_Nup120_160 eIF2A Beta-prop_IFT122_1st Cytochrom_D1 Beta-prop_WDR19_1st NBCH_WD40 WD40_RFWD3 DUF7099 PEP5_VPS11_N WD40_MABP1-WDR62_1st Beta-prop_WDR75_2nd WD_LRWD1 WD40_like Beta-prop_LRRK2 Syd DUF5074 KRIT1_FRMD8_FERM_C
Other DBs
NCBI-ProteinID: UHG91813
LinkDB
Position
635982..636881
AA seq 299 aa
MIIEKIDTFGGHRDCVYALEHGPQPHQLFSAGADGLVVRWHLDRPDLGELVAKVPASVYA
LALHATSGLLWVGQNYEGVHLIDVFSKQEVNSLKLTTAAIFDIKFYKNDAIIALSDGVVI
VVDAEQLAIKKHLKASDQSARCIAVNPVEREVAIGYSDNTVRIFDLTTYALKRMIPAHAN
SVFTVAYSPDFRFLLTAGRDAHLKVWQVENEYTLHEDIVAHMFAINHLVYNPAGTLLATA
SMDKSIKLWDAETFRLLKVVDRARHAGHGTSVNKLLWTNYKNQLLSASDDRTVSVWKVA
NT seq 900 nt   +upstreamnt  +downstreamnt
gtgataattgaaaaaattgatacgtttggcggtcatcgtgactgtgtgtatgcactcgaa
cacggaccgcaaccccatcagctcttttctgccggagcagatggcttggtagtgcgctgg
catctggatcggcctgatctgggagaactggttgcaaaagttccggcttccgtatacgca
ctcgctttacacgccacgagcgggcttttatgggtagggcagaattacgaaggagtgcat
ctcatcgacgttttcagtaaacaagaagttaactcgttaaaactgactacggcggccatt
tttgacattaaattttacaaaaatgacgcaattattgcgctttcggatggggtagtgatc
gtcgttgacgccgaacagctggctatcaaaaaacacttgaaggcgtccgatcagtcggcg
cggtgtatagccgttaatcccgtcgagcgagaggtagccatcggttatagcgataacact
gtccggattttcgacctgactacctacgcgcttaaacggatgattccagcccacgctaat
tctgtctttacggtggcctattcgcctgattttcgatttttgctaacagcaggacgcgat
gctcacctaaaagtatggcaggtcgaaaatgagtacacgttgcacgaggatatcgttgcg
catatgtttgccatcaatcatcttgtctacaatccggctgggacgttgctggcaacggcg
agtatggacaaatcaatcaaattgtgggatgctgaaacgttccgtctgttgaaggttgtt
gatcgcgcccgccatgccggacatggtacatctgttaataaattgttgtggactaattac
aagaatcagttgctttcggcaagcgacgaccgcacggtttcggtctggaaagtagcctaa

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