Spirosoma oryzicola: LQ777_03035
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Entry
LQ777_03035 CDS
T08981
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
soq
Spirosoma oryzicola
Pathway
soq02024
Quorum sensing
soq03060
Protein export
soq03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LQ777_03035 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LQ777_03035 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LQ777_03035 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
soq02044
]
LQ777_03035 (ffh)
Enzymes [BR:
soq01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LQ777_03035 (ffh)
Secretion system [BR:
soq02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LQ777_03035 (ffh)
Eukaryotic Sec-SRP protein
LQ777_03035 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
nSTAND3
AAA_22
AAA_30
AAA_33
AAA_18
CLP1_P
ATPase
AAA_16
KTI12
ParA
ATP_bind_1
APS_kinase
cobW
AAA_17
AAA_31
MeaB
KAP_NTPase
ResIII
NTPase_1
MMR_HSR1
ArsA_ATPase
Helicase_RecD
ATPase_2
YqeC
SRPRB
Thymidylate_kin
NPHP3_N
MobB
NACHT
AAA_14
ABC_tran
DO-GTPase1
AAA_25
AAA_28
Chlamy_scaf
AAA
AAA_19
AAA_24
Motif
Other DBs
NCBI-ProteinID:
UHG91883
LinkDB
All DBs
Position
complement(719111..720430)
Genome browser
AA seq
439 aa
AA seq
DB search
MFENLQDKLNKAIKTLKGQGRITEINVAATIKEVRRALTDADVNYKVAKDITDRIRDKAL
DRKVLISVEPGQLFVKIVQEELTELMGGEAQGINVKGDPAVVLIAGLQGSGKTTFSGKLA
SHLKRQGRNVLLVAADIYRPAAIDQLKVLGEQVGVEVYSEPENKNAVQIAQNAISQARKT
GKKIVIVDTAGRLAVDEAMMQEIEAVKRAISPTETLFVVDSMTGQDAVNTAKTFNERLDF
DGVVLTKLDGDARGGAALSIKTVVNKPIKFISTGEKMEALDVFYPDRMASRILGMGDVIS
LVERAQQAFDEEEAKRINAKMRKNQFDFDDFLSQLQQIKKMGNVKDLLGMIPGMGKMIKD
LDIDNDSFKPIEAIISSMTPKERQRPDIIDGSRKKRIAAGSGTNITQVNNLLKQFDEMRK
MMKKMNTMQASGKLNKMMK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagaaccttcaggataaactcaataaggcgatcaagaccctaaaagggcaaggt
cgcatcaccgaaatcaacgttgcggccaccattaaagaagtacgtagagcattaacggat
gccgacgtaaactataaggttgccaaagacattacagaccggattcgtgacaaagccctc
gaccggaaagtgcttatctcggtagaacccggccagttgttcgttaagatcgtgcaggaa
gagttgaccgaactgatggggggcgaagcgcagggcatcaacgtcaaaggtgatcctgcc
gttgttctgatcgccggtttgcaaggatcgggtaaaaccacgttctccggtaagctggca
tcgcacctgaaacggcagggtcgcaatgtactgctggtagcggctgacatttaccgcccg
gcggctatcgaccagttgaaagtacttggcgagcaggttggcgtagaggtctactcggaa
ccagaaaacaaaaatgccgttcagatcgcgcagaacgcgatttctcaagctcgtaaaacg
ggcaagaagattgtgatcgtcgatacagccggccgtttggcggtcgatgaagcgatgatg
caggagatcgaagccgttaagcgagcgatcagcccgaccgaaacgttgttcgtcgttgac
tccatgacgggtcaggatgcggtcaacacggcgaaaacctttaacgagcgccttgacttc
gacggtgttgtactaaccaagctcgacggtgatgcacgcggtggtgcggctctttcgatc
aagacggttgtcaataagcctatcaagttcatcagcacgggcgaaaaaatggaagccctt
gacgtgttctatcccgaccggatggctagccggattctggggatgggcgacgtcatttcg
ctagtagagcgggcgcaacaagcgtttgacgaagaagaagcgaaacgcatcaacgccaag
atgcgcaaaaaccagttcgactttgacgacttcctctcgcagctacagcagatcaagaag
atgggtaacgtcaaggatctgctgggtatgattccgggaatgggcaagatgatcaaagac
ctggatatcgacaacgattctttcaagcctattgaagcaatcatcagctcgatgacgcct
aaagaacggcaacgtcccgacattatcgacggaagccgcaaaaaacgcatcgctgccggt
agcggtaccaacatcacgcaggtaaacaatctgttgaagcaatttgacgagatgcggaag
atgatgaagaaaatgaataccatgcaggcatcgggcaagctgaataaaatgatgaagtaa
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