Spirosoma oryzicola: LQ777_03095
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Entry
LQ777_03095 CDS
T08981
Name
(GenBank) DEAD/DEAH box helicase
Organism
soq
Spirosoma oryzicola
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Phage_tail_T
ERCC3_RAD25_C
SSV1_D-63
AAA_14
Motif
Other DBs
NCBI-ProteinID:
UHG91895
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Position
complement(733728..736700)
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AA seq
990 aa
AA seq
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MKVSPSEPFQIVYSLLEHEFLGYLIEAFVVQLNGRGELTLLNQTLSTQNVSEFSQELDER
DFELVRLIESIQQDTIVKKFNTRKLPAIDFFLKIYDPHKGDKLIQEAICSYLETIKAKIL
ALLPGKTFYVMGSDGNPVWAPIEWMPQPARVHFHFVRNADSTNYFPIIRYPIGENGETER
VEFQFKGALMICDEPAYLMVNNRVYHFSKHVDGKKLRPFFTKNHIIIPKNIEQQYYERFV
TQLIASYDVYAKGFEIRAEIIEPVPVLTVSEMVTSSRAVAVGAANDGPDADDEASQRIAF
DLSFQYGDFTFRFDSFGPSANVSLEKKGEDYIFHKIRRDLRLEKQKLAFLRETGLDLRHG
RLAIPKSEAFAWLSANNLAINEAGFTLRQNAEDTKRYFLGYSSIDVSIEEGRDWFDIYAN
VRFGEFEIPFLKLRTLILNKKHEFTLPNGEIAVIPEVWFTKYSELFGFMEQPDSVDPRDA
DRLVLQKHHLALVQELERDNLATTIMSRKLERLRDFEEIESFAVPQGFNGTLRPYQRAGY
DWMNFLRQYRFGGCLADDMGLGKTVMTLAMLQGQKEAGALEPSLLVMPTSLLYNWELEAR
KFTPNLRVMVYTGTYREKNTAQFDGYDLILTSYGIVRIDIDILSDYRFNYVILDESQAIK
NPSSHITKAVMQLNTANRLILTGTPLENSTMDIWTQMSFINPGLLGSQSFFRNEFQIPIE
KRHDDVKTARLYSLIKPFMLRRNKAQVATDLPEKVESVLFSEMTPDQEKQYEEAKSFYRN
LILERIEEDGMAKSQMIVLQGLTKLRQIANHPRMVDDEYEGDSGKLSDVLIRLESAMIEH
HKVLVFSQFIKHLNVVRQYLKEKNIKYAYLDGSTQDRQSQVQLFQTDDSVKLFLISLKAG
GLGHNLTAADYVFILDPWWNPAIEAQAVDRAHRIGQQKTVFTYKFIAKNTVEEKILSLQR
AKQQLAGSLIATEENFMKSLTKEDIMVLLE
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtttcgccttccgaacccttccagattgtttactcgctgttggagcatgaattt
ctgggctatcttattgaagcatttgtcgtgcaattgaatgggcggggcgaattgacctta
ctgaaccagacgctttccacacaaaacgtgagcgagttttctcaggagcttgacgaacgt
gattttgaactggtccgcctgatcgaaagcatccagcaggataccattgtcaagaagttc
aacacgcgcaaactgcccgctatcgatttcttcctgaagatatacgacccccacaaaggc
gacaaactcattcaggaagctatttgcagttatctggaaacgatcaaggcaaaaattctg
gcgcttcttcccggcaaaacgttttacgtaatgggcagcgacggtaaccctgtttgggca
cccatcgagtggatgccgcagcccgccagagtgcatttccattttgtccgtaacgccgat
tcgaccaactacttcccgatcattcgttacccgattggcgaaaatggcgaaaccgaacgc
gtggagtttcaattcaaaggtgcgctgatgatctgtgacgaaccggcttacctgatggtc
aataaccgggtctatcatttcagcaagcacgtcgacggtaaaaagctcaggccgttcttt
acgaagaaccacattattatcccgaaaaatattgagcagcagtactacgaacgctttgta
acgcagctcatagcatcctatgacgtatatgccaaagggttcgaaatacgggctgaaatc
attgagcccgttcctgttttgaccgtttcggaaatggtaacgtcaagccgggcggtagct
gttggagccgccaacgacggaccggacgccgatgatgaagccagccagcgcattgcgttt
gacctgtcgtttcaatacggcgattttacgtttcggttcgatagtttcggcccatcggcc
aatgttagcctggaaaaaaagggagaagattacattttccacaaaatccggcgtgacctg
cgtctggaaaagcaaaagctggcgttcctgcgcgaaacgggtctggacttgcgtcatggc
cgtctggctattccaaagtcagaagcttttgcctggttgtcagccaacaacctggcaatc
aacgaagcaggtttcacgcttcggcagaacgccgaggacaccaagcggtattttctgggg
tattcgagcattgatgtttccatcgaagagggccgcgactggtttgatatttacgccaat
gtccgcttcggtgagtttgaaattccgtttctgaaactcaggacccttattctcaacaag
aagcatgagttcacgcttcccaatggtgagattgccgttattccggaggtgtggttcacc
aagtactcggaattattcggcttcatggagcaacccgacagtgttgatccgcgcgatgcc
gaccgactagtcctgcaaaaacatcacttggcgctggttcaggaactggagcgcgacaat
ctcgcgacgacgattatgagccgcaagctcgaacgcctgcgcgattttgaagaaattgaa
tcgtttgctgtgccccaaggttttaacggaaccctccgcccttatcagcgggctggttac
gactggatgaattttctgcggcagtatcgctttggtggttgcctggccgatgacatgggt
ctgggtaaaacggtaatgacgctggctatgcttcagggacaaaaggaagcgggagcgctc
gaaccttccctgctggtcatgcctacgtcgctgctgtacaactgggaactggaagcccga
aagtttacgcctaacctgcgcgtgatggtgtatacaggtacgtatcgggagaaaaacacg
gctcagtttgacggctacgaccttatcctgacctcttacggcattgtccgcatcgacatc
gatattctgagcgattaccgcttcaactacgtcattctggacgaatcgcaggccatcaaa
aacccttcgtcgcacattaccaaagcggtgatgcaactgaacacggcaaaccggcttatc
ctgacgggtaccccgctcgaaaacagcacgatggatatctggacgcagatgtcgtttatc
aaccccggtttgctgggtagtcagtcgtttttccggaatgagtttcagataccgattgaa
aagcgccacgacgacgttaaaaccgcacgactgtatagcctcatcaagccgtttatgctt
cggcgcaacaaagcgcaggtcgccactgatctgccggaaaaagtagaaagtgttcttttt
tcggaaatgacgcccgatcaggagaagcagtacgaagaagcgaaatccttctaccgaaat
ctcattctcgaacgcattgaggaagacggcatggctaaatcgcagatgattgtcttgcag
ggtctgacgaagctacgccagattgccaaccacccgcgcatggttgacgacgaatacgaa
ggtgattcaggcaaactctccgacgtactcattcgcctggaaagcgccatgattgagcat
cacaaagttctggtattcagccaattcatcaaacacctgaacgtggttcggcagtatcta
aaagaaaaaaacatcaagtatgcgtacttggatggctctacgcaggatcgtcaaagccag
gttcaactgttccagaccgacgattcggtaaagctgtttttgatttcactgaaagcgggt
ggattgggtcacaacctcaccgcagccgattacgttttcattctggacccttggtggaac
ccagccattgaagcgcaggccgttgaccgcgcccatcgcattggtcagcagaaaaccgtt
ttcacgtataagttcattgccaaaaacacggtcgaagagaagattctgtccttgcaacgc
gccaagcagcaactggccggaagtctgattgccacggaggaaaacttcatgaaatcgctg
accaaggaagatattatggtactgctcgaataa
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