Spirosoma oryzicola: LQ777_03330
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Entry
LQ777_03330 CDS
T08981
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
soq
Spirosoma oryzicola
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
soq03032
]
LQ777_03330
03036 Chromosome and associated proteins [BR:
soq03036
]
LQ777_03330
03400 DNA repair and recombination proteins [BR:
soq03400
]
LQ777_03330
DNA replication proteins [BR:
soq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LQ777_03330
Chromosome and associated proteins [BR:
soq03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LQ777_03330
DNA repair and recombination proteins [BR:
soq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LQ777_03330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
RecA-like_ORC2
HU-DNA_bdg
HU-CCDC81_euk_1
HTH_IclR
DUF2267
Motif
Other DBs
NCBI-ProteinID:
UHG91941
LinkDB
All DBs
Position
complement(798155..798457)
Genome browser
AA seq
100 aa
AA seq
DB search
MTKADVIAEIADKTGIDKAEVTNTLETFFSVVKDSLAEGENIYVRGFGSFINKKRAKKVA
RNISKNTAMVIDEHYIPSFKPAKVFVEQVKTSDKAKVAAE
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaaagcagacgtaattgcagagatcgccgataagaccggaattgataaggctgag
gtaacgaacacccttgagaccttcttttcggtagttaaggactcgttggccgagggagag
aatatttatgtgagagggttcggcagtttcatcaacaagaaaagagccaagaaagtagcc
cggaacatctcgaagaacaccgctatggtaatcgatgagcattatattccgagctttaag
cccgccaaggtttttgttgaacaagtaaaaaccagcgacaaagccaaagttgcggctgag
taa
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