Spirosoma oryzicola: LQ777_03485
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Entry
LQ777_03485 CDS
T08981
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
soq
Spirosoma oryzicola
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
soq01011
]
LQ777_03485
Enzymes [BR:
soq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LQ777_03485
Peptidoglycan biosynthesis and degradation proteins [BR:
soq01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LQ777_03485
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM2_CERK1_LYK3_4_5
Phospho_p8
CCD
Motif
Other DBs
NCBI-ProteinID:
UHG91972
LinkDB
All DBs
Position
complement(832636..834258)
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AA seq
540 aa
AA seq
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MNHLNRSLLRMGLLSAMLGLTIMSSAETTIQSGQGGASPQSSDSTIVKKDTVALVPTVPD
SILRERLTKIQKTIPLNYHKSVQAYVDYFTFRKASATKLMLERMPLFFPLYERMLSDYGL
PDELKYLSIVESALNPRAISRAGAGGLWQIMPGTGRDLRLYQDDYVDERMDPVKATEAAC
KYLRDLYNIFGDWELAMAAYNCGPGAVKRAMRRSGGDSFYTIFDALPKETRGYVPQFVAF
TYLMHHANDHGIFAENYEHPIPHDTIQITGYFNLETFAKHSTMPLADLQKMNPAITTTIL
PEYTRRYPLRIPRQQYAYFSTRRRAIMDSASQIPPAMAHMLLASAEDVRYGADSIGAWSN
LGSNPLARMTLDETPSLGTISGEKPAKLAAQLAVAESADEPEEDMETVVLRKPRKQTYVV
KRGDNLGDIAERFSVELYDLKRWNHLRSTRIQRGQKLTILKEAAETRAEKLADQGTAKGR
KKAEVVAKTKRYKPKYHRVQEGDTLWNIAQRYDGLTIDQLKKLNHMRNSALRPGQKLIVG
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacttgaaccgtagcctgttacgaatggggctgttgagtgcgatgctgggcctg
acgatcatgtccagcgccgagactacgattcaatccggacaaggtggtgccagtccacaa
tcctctgatagtacgattgtcaaaaaagataccgttgccttagtaccgacggttcccgac
agtatcctgcgcgaacgtctgaccaaaattcagaaaacgattccgctcaactaccacaag
tcggttcaggcctatgtcgattattttacgtttcggaaggcaagcgctacgaagctgatg
ctcgaacggatgccgctcttttttcccctctacgagcgaatgctgtcagattatgggcta
cctgacgaactgaaatacctgtctattgttgagtctgcgttgaacccgcgtgccatatca
cgagcgggagccggtggcctctggcaaatcatgcccggtacgggccgcgacctgcgcctg
tatcaggacgattacgtcgatgagcgtatggacccggtcaaagcaacggaggctgcctgc
aaatacctccgcgatctatacaacatctttggtgattgggagttggccatggctgcttac
aactgcggcccaggagccgtcaaacgagccatgcgccgttcgggaggtgattcattctac
accatttttgatgccctgcccaaggaaacacgtggctacgttccgcaatttgtagcgttc
acctacttgatgcaccacgctaacgaccacggtattttcgccgagaactacgagcatccg
atcccgcacgacaccatccagattacgggttatttcaacttggagacgttcgccaaacac
agtacgatgcccttggccgacttgcagaagatgaatccagccatcacaacgacgattctg
cccgagtataccagacgatacccgttacgaatacctcgtcagcaatacgcgtatttctcg
acacggcgtcgggccattatggactcggccagccaaatacccccagcgatggcccatatg
ctgctggcaagtgccgaagatgtgcgctacggagccgattcgattggggcctggtcgaat
ctgggtagcaatccgttggcacggatgacgctggatgaaacgccttcgcttggtaccatc
tcgggtgaaaaaccagctaagctagcggctcagttggccgtagcggaatccgccgacgaa
ccggaggaagacatggaaacggtcgttttacgaaagccccgcaagcaaacgtatgtcgtc
aagcgtggtgataacctgggtgacattgccgaacggttcagcgttgaattgtacgaccta
aagcgctggaaccacttacggtcaactcgaattcagcgagggcagaagctaacaattttg
aaagaagcagcggaaacccgtgcggaaaaactggccgatcagggtaccgccaaaggacgc
aaaaaagctgaagttgttgctaagacgaagcgatataagccgaaataccaccgcgttcag
gaaggcgatactctctggaatattgctcaacggtacgacggtttaacaatcgatcaactc
aaaaagctgaaccacatgcgcaacagcgcgctccgtccgggtcagaaactgatagttggg
taa
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