Spirosoma oryzicola: LQ777_04090
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Entry
LQ777_04090 CDS
T08981
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
soq
Spirosoma oryzicola
Pathway
soq00470
D-Amino acid metabolism
soq00550
Peptidoglycan biosynthesis
soq01100
Metabolic pathways
soq01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LQ777_04090
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LQ777_04090
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LQ777_04090
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
soq01011
]
LQ777_04090
Enzymes [BR:
soq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
LQ777_04090
Peptidoglycan biosynthesis and degradation proteins [BR:
soq01011
]
Precursor biosynthesis
Amino acid ligase
LQ777_04090
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
GARS_A
ATP-grasp
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
UHG92089
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All DBs
Position
complement(995374..997026)
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AA seq
550 aa
AA seq
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MKIGIFFGGPAREREVSYAGGRTALANLDKGLFEPVLVFVDGRGRFRLVEPEFLMHPSLR
DALPQDKSGFSVYDESLDQDVLEAALPEIRPEQFRDHFDMAFLAMHGPDCEDGAIQGLLE
WYKMPYTGPGLVGSAVGINKILQNELIALANGQQKKTATISRDAYEQADKAQFFQSLTEH
LGLPIVVKAPHQGSSIGVAIVREADLAQFCRAVEQCFFTMSIRPNGWSKLGEWSDLSADE
KREMAQTMVSLDSAISFPVVIEQTGEVIHHPNDFIEKLDALASSGSSITLASLNAEDEVL
FEEFISGQEFSCGVIQDDDQMAIALPPTEIYNVTSFDFESKYKLNTTKKRIPVETTLENN
RKIQLAVAEVFTRLGINVYARIDGFLTPDGRVLLHDPNTIPGMSPSSLIFKQMAEIGLNL
SNSLTYLIRQSLRERIRSGKDTFHLKRLLADLDAQLANRKANPLPERVISFGSSDEEFLA
AKQQYNELAASGVVRPSLMYIKGKAESHEIPVYLLFKDTIAELEIALSQPRHSLLIETAE
QTAHITARYI
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaataggcattttcttcgggggcccagcgcgggagcgcgaggtgtcgtatgcaggt
gggcgcacagctctggcaaatttagacaaaggcttgttcgagccagttctggtattcgta
gacgggcgcggacggttccgactcgttgaacctgaatttctgatgcatccgtccctgcgc
gacgctttaccccaggacaaatcaggattctcggtgtacgacgaatcactcgaccaggac
gtactggaagcagccctgcctgagatacgtccagaacaattccgcgatcatttcgatatg
gcatttctggccatgcacggacccgactgcgaagacggtgcgattcagggtttactcgaa
tggtacaaaatgccttacacgggtcctggtctggttggttcagcggtaggcatcaataaa
attttacaaaatgagttgatcgcgctcgccaacgggcaacaaaagaaaacggctaccatt
agccgcgatgcgtatgaacaggccgataaagcccagttctttcagtcactgaccgagcat
ctgggtttgcccatcgttgtgaaagcaccccatcagggttcgtccatcggcgtagccatc
gtgcgggaagctgacctggcgcagttctgccgggcggtcgagcagtgcttctttacgatg
agcattcgtcccaacggatggagtaaattaggcgaatggtccgacctgtcagccgacgag
aagcgggaaatggctcagacaatggtaagcctggattcggctattagctttcccgtcgtg
atcgagcaaacgggcgaagtaattcatcaccccaacgatttcatcgaaaaacttgatgcg
ctggcttcgagtggctcctccattacgctggcctcacttaatgcggaagacgaagtgctg
ttcgaagaatttatcagcgggcaggaattttcgtgcggagttattcaggatgacgaccaa
atggcgattgcgttgccaccgaccgaaatttacaacgtaaccagctttgatttcgagtcg
aagtataaactcaacaccaccaaaaaacggattccggtcgaaacgacgctggaaaacaac
cggaagattcaattagcggtagccgaagtatttacgcgcttagggattaatgtgtacgca
cgcattgatgggttcctgacgcccgacggtcgggtactgcttcacgatccgaacaccatt
ccgggtatgtcgccgtcctcccttattttcaagcaaatggccgaaattggtctgaacctg
tcgaactcattgacttacctgattcgtcaatcgctacgtgaacggattcgctcgggaaaa
gacactttccacctcaaacgattgctggccgatcttgacgctcaactagccaaccgcaaa
gccaatccgctacccgaacgggttatttcgtttggatcgagcgacgaggaattcttggca
gccaagcagcaatacaacgagttagcagcctccggagtcgttcgtccgtcgcttatgtac
atcaaagggaaggctgaatcgcacgagattccggtttatctacttttcaaagacacgatt
gccgagttggaaatagcgctaagccagccgcgccattcgctacttattgaaacagcggaa
caaactgctcatattacggcgaggtatatttag
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