Spirosoma oryzicola: LQ777_04170
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Entry
LQ777_04170 CDS
T08981
Name
(GenBank) TonB-dependent receptor
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
soq
Spirosoma oryzicola
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soq02000
]
LQ777_04170
Transporters [BR:
soq02000
]
Other transporters
Pores ion channels [TC:
1
]
LQ777_04170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
CarboxypepD_reg
TTR_TEN1-4
MetallophosN
Motif
Other DBs
NCBI-ProteinID:
UHG92105
LinkDB
All DBs
Position
complement(1011211..1014306)
Genome browser
AA seq
1031 aa
AA seq
DB search
MKKLFLISLLMLVATWSSFAQGQVVSGRVTSSDDGSGLPGVSVSVKGQTQGTLTDASGNY
RLSVSGDVTLVYSFIGFTSVEERVNNRSVINITLQTDVRNLSEVVVTGYGQQIKRDLTGN
IAKVKAADIQDQPVTTFDQALQGKAAGVQINAGSGKLGQGIQVRVRGQSSVSASNQPLYI
VDGIPVTTDNLSINSGSTNPLADINPQDIESVDILKDASAGAIYGARAANGVVLITTKKG
KAGRTNINFGAQYGSSKPTRKLEFLNTEQYVNFYNKAAANADRLDGLDPSDPSSNTSYMK
SFYETQGLGTYGTPNQVSTNWGDLAYQDAPYQQYDLNINGGNEKTTFYLSGQLLDQKGIL
IGNAIKRYAGRLNLDHQVSSRFRVGLNMGLTRTYNERLSADNQFDNPMQMVALPPMTPAN
DPQTGLPVGTPPGDISIPVYYDPLINIGNSYFNTTVYRNISNVYGQLNIAKGLSFRSEFG
VDVLNQQEELYYNSKTQRNFSAPLGYGRNRYVRVENYNTNNFFSYNTLFGRHNIDATVGM
SYQQSQQKTNYTEGRDFPSDAYRQIASAARKTDGSSTQSDFRFLSYFARANYKFSDRYLV
GVSARIDGSSRFGRNSRYGFFPAVSAGWVLSEESFLKNNRAISFLKLRSSYGRTGNADIQ
TAGNVSLQNFPQLGLFTGDASYGAQPGQRPFQLANPDLKWETTDQFDIGIDFGILNNRIN
GEIDYYNKQTSGLLLNVNVPGTTGFATQFKNVGNLQNKGFEFVLNTENLTGAFRWTTSLN
AATNQNKITNLQSQIIEGGLNAMSRAVEGQPLGVFFTQEYAGVDPAKGDALWYKNTPNPD
GSLDRSTTNVYSQAQRVVVGSPLPTWTGGVTNTFSYKGISLSVFFNGVFGNKLNFYGVGR
FSSANGRFEDNQTVNQLAAWTPENPNTNVPEARLFYNNGAQPSSRFVLDGSFVRLRTVTL
SYNLPKLLVNRAKLNTVRVFVTGQNLLTFTKYAGWDPEVNTDYAVSNIAQGYDFYTAPQA
RTITGGINIGF
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaactcttcttgattagccttctgatgcttgtcgcaacttggagcagctttgca
cagggtcaggttgtttcgggccgagtcacctcctccgatgatgggtcgggcttgccggga
gtgtccgtcagcgtaaaaggacagacacagggtaccttgaccgatgcctcgggtaattat
cgcctgtcagttagcggagacgttacgcttgtttatagcttcatcggctttacatcggtc
gaagaacgcgtcaacaatcgatcggtgattaacataaccttgcagaccgatgttcgcaat
ttgagcgaagtagtggtcacgggctatggtcagcagatcaagcgtgatcttacgggtaac
atcgccaaagtcaaagccgctgacattcaggatcagcccgttactaccttcgatcaggcg
cttcagggaaaagcagccggtgtacagatcaacgccggttcgggtaaactggggcaggga
attcaggtacgggtacggggtcagtcgtcggtatcggcgtcgaaccagccgctttacatt
gtcgatggtattccggttactacggataacctgagtatcaacagcggctcgaccaaccca
ctggccgatattaacccgcaggatattgaatcagttgacattctgaaagacgcgtcggcg
ggtgccatttacggagcgcgggccgccaatggtgtcgtactgattaccaccaagaaaggg
aaagcgggccggaccaacatcaatttcggcgcgcaatacggttccagcaaaccaacgcgc
aaactcgagtttctgaatacggagcagtacgtcaacttttacaacaaggcagcggccaac
gctgaccgcctggacggtcttgacccaagcgatccgtcatcaaacacgtcgtatatgaaa
agcttctacgaaacgcaggggctgggtacgtacggaacgccgaatcaggtaagcaccaac
tggggtgatctggcttatcaggatgccccctatcagcaatacgacctgaacataaacggc
ggtaacgagaaaacgacgttctatctatcaggccagttgctggatcagaaaggaattctg
attggcaatgccatcaaacggtatgccggtcgcctgaacctcgatcaccaggtatcgagc
cggttccgggttggcctgaacatgggtctaacccgcacctacaacgagcgcctttcggct
gacaaccagttcgacaacccgatgcagatggttgcgttgcccccaatgacacccgccaac
gacccacaaacgggacttccggttggtactccgcctggtgacatcagcattccggtttat
tatgacccgctgatcaacatcggcaactcgtatttcaacacgacggtttaccggaatatc
agtaatgtgtacggtcagctgaacattgccaaaggcttatcgttccgctctgaattcggc
gttgacgtcctcaatcagcaggaagaactgtattacaacagcaaaacacaacggaacttt
agcgctccgctaggctacggtcggaaccgttacgttcgtgttgagaactacaatacgaac
aacttcttctcgtacaacacgttgttcggccgccacaacatcgacgctaccgtcggtatg
tcgtaccaacagtcgcaacagaagaccaactacacagaaggacgtgactttccctcggat
gcgtaccgccagatcgccagtgccgcccggaaaacggatggtagctcgactcagtcggat
ttccgctttctgtcgtattttgcccgtgccaactacaagttttcggatcgttatctggta
ggcgtcagcgcccggatcgatggatcgtcgcgtttcggtcggaacagccgttacggtttc
ttcccggcggtatcggcaggctgggtattgtcggaagaaagctttctgaaaaataatcgc
gccatcagcttcctgaaactgcggtcgagctatggccggacggggaacgccgatatccag
acagcggggaacgtatcgctgcaaaacttcccccagttaggtctgttcacgggtgacgcc
agctatggcgcacagcccggtcagcgcccattccagttggccaaccctgatctgaagtgg
gaaactaccgatcaattcgacatcggtatcgacttcggtattctgaataatcgcatcaat
ggcgaaatcgactattataacaaacaaacgtcgggtctgctgctgaacgtcaacgtaccg
ggtacaaccgggtttgctacccagttcaaaaacgtcggtaatctgcaaaataaaggcttt
gagtttgtgttgaacacggaaaacctgacgggtgctttccgctggaccacaagtctgaat
gccgcaacgaatcagaataagattacgaatctacaaagtcagatcatcgaaggcggtctt
aacgccatgagccgtgccgttgaagggcaaccgctcggtgtgttctttacacaagagtat
gccggtgttgatccagctaagggtgatgcgctttggtacaagaatacgccaaatcctgac
ggcagcctggatcggtcaacaacgaacgtgtacagtcaggcacaacgcgtagtagttggt
agcccactcccaacctggacgggtggtgtcaccaacacgtttagctataagggtatcagc
ctgagtgttttcttcaacggtgtgtttggtaacaagctgaacttctacggtgtaggacgc
ttttcgtcggcaaatggccgattcgaagataaccagacggtgaaccagttggccgcctgg
accccggaaaatccgaataccaacgtaccggaagcccgcttgttttacaacaatggcgct
cagccttcgagtcgtttcgtgctcgatggttcattcgttcgattacgcacggttaccttg
tcgtacaacctgcccaagctgcttgtcaaccgggcgaagctgaacacggtacgtgtgttc
gtaaccggccagaacctgctaacgttcaccaagtatgcgggttgggaccctgaggtcaat
acagactacgccgtttcgaacattgcccagggttatgatttctacacggctccgcaggca
cgtacgatcacgggtggtatcaacatcggtttctaa
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