Spirosoma oryzicola: LQ777_04285
Help
Entry
LQ777_04285 CDS
T08981
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02481
two-component system, NtrC family, response regulator
Organism
soq
Spirosoma oryzicola
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
soq02022
]
LQ777_04285
Two-component system [BR:
soq02022
]
NtrC family
Unclassified
LQ777_04285
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA
AAA_2
Mg_chelatase
AAA_19
AAA_16
AAA_7
MCM
TIP49
HTH_29
bpMoxR
AAA_22
AAA_30
Xre-like-HTH
HTH_17
CENP-B_N
TsaE
HTH_28
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
UHG92127
LinkDB
All DBs
Position
complement(1043215..1044555)
Genome browser
AA seq
446 aa
AA seq
DB search
MPGTILIIDDEPKLRQLLARILTLEDYQVLEADDVRSGLRTLERTEVQLVISDVKLPDGN
GIDLTAQVKKMQPATEVIVLTAYGTIADGVKAIKNGAFDYITKGDDNDKIIPLVSRAIEK
AELQFRIKRLEEQVQQKYGFEKIIGHSKAIQQAVDLARRVAVTDTTVLLTGETGTGKEVF
AQAIHQASPRRTGSFVAVNCSALGKEILESELFGHRAGAFTGAARDKKGLFEEANKGTIF
LDEIGEMALDLQAKLLRVLETHEFMRVGDTKPTKTDVRVVAATNRDLKHDAESGLFRSDL
YYRLSVFSIELPPLRDRRDDIPALAQVLTQQEAAKIGKRQMSLSPAFMEALTRYNWKGNI
RELKNVIERAVILSDGQTLLPEYLPLDVQSPSNSSSTPFSYDLTSVEKNHIEQVLRHTNG
NKAEAARLLGIGLSTLYRKIEEYRLG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcaccatcctgattattgacgacgaacctaaactccgtcagttgctcgctcga
atcctgacgttagaagattatcaggttctggaagcagacgatgtccggagcgggcttcgt
acgttggaacgcaccgaagtgcagttggtcatcagcgatgtaaagctacccgatggcaat
ggtatcgatctgaccgcgcaggtaaaaaagatgcaaccagctacggaggttatcgtactg
accgcgtatggcaccattgccgacggcgtgaaagcaattaaaaacggcgcgttcgactac
atcaccaaaggcgacgacaacgataaaatcattccgctggtgagccgggctatcgaaaaa
gcggaactgcaatttcggatcaagcggctggaagagcaggtccagcagaagtacggtttc
gagaagatcataggccactcaaaagccattcaacaggcggtggatctggcgcgccgggta
gcggtgaccgataccaccgtgctgctgaccggagaaaccggaaccggtaaggaagtattt
gcgcaggccattcaccaggccagcccccgccggacggggtcgtttgttgccgtcaactgt
agtgcactgggcaaagaaattctggaaagcgaactctttgggcatcgtgcgggtgctttt
accggtgccgcacgcgacaaaaaaggattgtttgaagaagccaacaaaggcactattttt
ctggatgaaatcggagaaatggccctcgaccttcaggctaaattattgcgtgtgctcgaa
acgcacgagtttatgcgcgtgggcgacacaaaacccacgaaaaccgacgtacgcgtggtt
gccgctacgaatcgcgatctgaaacacgatgccgagtcgggcctttttcggtcggatctg
tactatcggctttcggtgttttccattgaactacctcccctgcgcgaccggcgcgacgac
attccggcgcttgcccaagtactgactcagcaggaagccgccaaaattggcaaaaggcag
atgagcctaagtccggcttttatggaagcccttacccggtataactggaagggtaatatc
cgcgaattgaaaaatgtcattgaacgggcggtcatcctcagcgacggacaaaccttactg
cctgaataccttccgctggatgttcaatctccttcaaattcctcttcgaccccgttttcg
tacgacctgacaagcgttgaaaaaaatcatattgaacaggttttacgccacacaaacggt
aacaaagcggaagcagcccgattactgggtattggcttaagtacgctttaccgaaagatc
gaagaataccgattaggctag
DBGET
integrated database retrieval system
