KEGG   Spirosoma oryzicola: LQ777_04800
Entry
LQ777_04800       CDS       T08981                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K07713  two-component system, NtrC family, response regulator HydG
Organism
soq  Spirosoma oryzicola
Pathway
soq02020  Two-component system
Brite
KEGG Orthology (KO) [BR:soq00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LQ777_04800
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:soq02022]
    LQ777_04800
Two-component system [BR:soq02022]
 NtrC family
  HydH-HydG (metal tolerance)
   LQ777_04800
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA HTH_23 AAA_2 AAA_22 HTH_29 Xre-like-HTH AAA_16 HTH_30 nSTAND3
Other DBs
NCBI-ProteinID: UHG92226
LinkDB
Position
1193710..1195188
AA seq 492 aa
MEKILIVDDNNDICLLLERFLSKQGYKTASVQRGEDGLMLLRKETFELVICDFKLPDIDG
LEMLRRIKVLNPSTAVIIITGYSDVRIAVQTVKHGAYDYVTKPLYPDEILHTIKNALERR
SQSLSAAVEPSVTPAASGTTPTKATPSKTSTSKALVAPNGKRFIFGKSRVAEQLQKHIDL
IAPTDMSVIITGETGTGKEFVASAIHLKSKRADKPFVAIDCGALSKDLAGSELFGHVKGA
FTGAMADKAGSFEFANGGTLFLDEIGNLSYDNQIKLLRVLQERKIRRIGSNQDIAVDVRI
IVATNEDLRDAVRQGRFREDIYHRIAEFEIHLSPLRERKADIMIFAEHFLELANQQLEKD
IIGFNDEAKDKLKEYFWHGNLRELQNVVKRSVLLTQGDYIEVDVLPQEIISPQYLAPESV
PTAQVSYDPARPGVPVISQSAANLKSVSENAERAAILKVLEKTGYNKTKAAEVLNIDRKT
LYNKLKAYDIHL
NT seq 1479 nt   +upstreamnt  +downstreamnt
atggaaaagattttaatcgttgacgataacaatgatatatgcctgcttctcgaacgtttt
ttgagcaagcaagggtataaaacggcgtcggtccaacggggtgaggatggtctcatgctg
ttaagaaaagagaccttcgagctggttatttgtgattttaaattacctgatattgacggc
ttggagatgttgcgccgaatcaaggtgctgaacccctctacagccgttattattataacc
ggctattccgacgtaaggatagctgttcagacggtaaagcacggcgcgtatgactatgtt
acgaagccgctttacccggacgaaattcttcatacaatcaagaacgcgctcgaacggcgg
agtcagtctctaagtgctgccgtcgagccgtcagttactcccgctgcttctggaaccacg
cccacaaaagcaactccttctaaaacatccaccagtaaggcgttggtagcgcctaatggc
aagcggtttatttttggtaaaagcagggtagcagaacagcttcaaaagcacatcgatctg
atcgctccgaccgatatgtctgtgattataaccggtgaaaccggaacgggcaaagagttt
gtcgcgagtgccattcacttgaaaagcaagcgggctgataaaccgtttgtcgctatcgac
tgtggtgcgttgagtaaagacctggcagggagtgagctgtttggtcacgtcaaaggtgct
tttacgggcgcgatggccgacaaagccggtagttttgagtttgctaacgggggaacgtta
tttctcgatgaaattggtaacctttcctacgataaccagattaaactactgcgtgtattg
caggagcgtaaaatccgtcgcattggctcaaaccaggatattgcggtagacgttcgcatt
atcgttgctacaaacgaagaccttcgtgatgcagtgcggcagggacgtttccgggaagat
atataccaccggattgctgagtttgaaattcacttgtcgccactacgtgaacggaaggca
gacattatgatttttgcggagcatttcttggaactggcaaatcagcaactcgagaaggat
atcatcgggtttaatgacgaagccaaggataaactaaaagaatatttctggcacggtaac
ctgcgtgaattacaaaacgtagttaagcgatccgtactgctaactcagggcgattacatc
gaggttgatgtattacctcaggagattatatcgccacagtatctggctcccgaaagtgta
ccaactgctcaagtaagttatgacccagcccggcctggtgttccggttatcagtcaatca
gctgccaatctgaaatctgtttcggaaaatgctgagcgtgctgctatcttgaaagtcctt
gaaaaaacagggtacaacaaaacaaaagcggcagaggtccttaatattgatcgtaaaacg
ctgtataataaactaaaggcgtacgatatccatttatag

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