Spirosoma oryzicola: LQ777_04990
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Entry
LQ777_04990 CDS
T08981
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
soq
Spirosoma oryzicola
Pathway
soq00500
Starch and sucrose metabolism
soq01100
Metabolic pathways
soq01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
LQ777_04990 (glgX)
Enzymes [BR:
soq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
LQ777_04990 (glgX)
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GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Glyco_hydro_31_2nd
DUF5696
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
UHG92262
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Position
complement(1235415..1237529)
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AA seq
704 aa
AA seq
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MSKHTSATSDEETIQSKPGKPYPLGATYDGEGVNFALFSESSTAAYLCLYDAGDPSREVA
RIPLTERTELVWHIYLDGLQPGQLYGYRVDGPYDPKAGYFFNPNKLLLDPYARAINEPVT
HNDSWLGYDYKNPSDDRYLIMSEEDSGPTMPKSVVVDSSFDWEDDQAPDVPLHRSVIYEM
HVKGFTHLHPTLPENIRGTYAGLGSAESIDYLKKLGVTAVELLPVHQFTDESYWGYNSIG
FFAPQNTYSSSGMAGQQVTEFKQMIKNLHKAGLEVILDVVYNHTAEGNQFGPMLSFQGID
NRAYYHQVGDKPEYYMDYTGTGNTVNLSHPRVLQMVMDSLRYWVTDMHVDGFRFDLAAAL
IRTDEEAGRVSSFLDTVAQDPILAQVKLIAEPWDIQSYHVGSFPVRWSEWNGKYRDALRG
FWKGDDGKAAETSLRLLGSPDLYSSDGRSPANSVNLITAHDGFTLNDLVSYNEKHNEANG
EDNQDGSNDNLSWNCGAEGPTDDPEINALRERQKRNFLTTMLLSQGTPMLVMGDECGRTQ
HGNNNGYNQDSEISWMNWDWNDKQQALFDFTSQLAALRREMPILSRRKFFTTEQVQFIRP
DGHEMTQDDLNNPGTHCIALFIDGLQVTEQTEDGQDIGDEQLVWVLNAFWEDIPFKLPKI
GRKQSMWEVVINTFDGQINPETEPTKGGQEFTVPARSSVLLRMK
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacacacatcggctacctctgacgaagagactatccaatcgaaaccgggcaag
ccttatccactcggtgccacgtacgatggcgaaggcgttaatttcgccctttttagtgaa
tccagcacagcagcctacctgtgcctgtatgatgcgggagatcctagtcgggaagtagcc
cgcattccactgacggaacgtacagaacttgtctggcacatataccttgatggcttgcag
ccaggtcagttgtacggttatcgcgttgatggaccttacgatcctaaggcgggctacttt
ttcaaccccaacaaactgctgctcgatccctatgcccgtgccatcaatgagcccgttacg
cacaacgattcgtggttaggttacgactacaaaaacccgtctgatgatcgctacttgatc
atgagcgaagaagacagtggtccaaccatgccgaagtctgtggtcgttgattcaagcttt
gattgggaagatgatcaggccccggacgttccgctgcatcgctcggtaatttatgagatg
cacgtgaagggctttacacacctgcatcctaccctacccgaaaatatccggggtacatat
gcaggcttgggatcagccgaaagcatcgattatctaaagaaactaggcgttactgccgtt
gagctgttgcccgttcaccagtttacggacgaaagctactggggctacaacagcatcggt
ttctttgctccccagaatacttattcctcgtcaggaatggccggtcagcaggtgacggag
tttaagcagatgatcaaaaacctgcacaaagcgggcttggaggttattcttgatgtggta
tacaaccacactgcggaaggcaaccagtttggtccaatgctgtcgttccagggtatcgac
aaccgggcttattaccatcaggtgggcgacaagccggagtattacatggactataccggt
acgggtaacacggttaatctaagccatcctcgggtgttgcagatggtcatggacagccta
cggtactgggttaccgatatgcacgtcgacggtttccggttcgatttggccgctgcgctg
attcgtaccgatgaagaggctggacgcgtatcttctttcctcgatacagttgctcaggac
ccgatcttagctcaggtaaaattaattgccgaaccttgggatattcaatcgtaccatgtc
ggtagtttcccagtacgctggtcagaatggaacggaaaataccgtgatgcgcttcgtggt
ttctggaaaggcgatgacggaaaagcggccgaaacatctttacgtctattaggaagcccc
gatctgtattcgagcgacggacgatcaccggccaacagtgtcaaccttattacggcgcac
gacggtttcacgttgaatgacttggtgagttacaacgaaaagcataacgaagccaacggc
gaggacaatcaggatggatcaaacgacaacctgagctggaactgtggcgcagaaggccct
accgatgatccggaaatcaacgcgctgcgcgaacggcaaaagcgtaatttcctgacaact
atgctgctcagtcagggtacaccaatgctcgtaatgggcgatgagtgtggccgtacgcag
cacggaaacaacaacggttataaccaggacagcgaaattagctggatgaactgggactgg
aatgacaagcaacaggctttgtttgactttacgagtcagcttgctgcgcttcggcgggag
atgccgattctaagccggcgcaagtttttcactaccgagcaagtacagtttatacgtccc
gacggtcatgaaatgacccaggatgatctcaataatccgggaacgcactgcatagccttg
tttattgacgggcttcaggtgacggagcaaacggaagatggtcaggacattggcgacgaa
caactggtgtgggtactgaacgcgttctgggaagatatcccgttcaagcttcctaagatc
ggtcgcaaacaatccatgtgggaagtagtcatcaacacgttcgatggacagattaatcct
gaaacggaaccaacgaaaggtggacaggaatttacggtccctgcccgctcctcagtactg
ttacgcatgaaatag
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