Spirosoma oryzicola: LQ777_05340
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Entry
LQ777_05340 CDS
T08981
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
soq
Spirosoma oryzicola
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
soq03016
]
LQ777_05340
Enzymes [BR:
soq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LQ777_05340
Transfer RNA biogenesis [BR:
soq03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LQ777_05340
Prokaryotic type
LQ777_05340
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GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
UHG92330
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All DBs
Position
complement(1316299..1317327)
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AA seq
342 aa
AA seq
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MSMTQGEASAGTPINSTIPGHESEHHHRPTSPLFALTILGAGSATPSLRYHPTAQLLTVG
NDYMLIDCGEGTQLRLIEQKIRSGRLRYIFISHLHGDHYFGLAPLLSTLNLGGRTEDLFL
FGPRGLDEILTTIFRMSDSRLGYRLHFQAVDPETPTLLLDHPQLTVESIPLQHRIDCSGY
LFREKPHPRKLIRQRLPDDIPVNYLKQLKDGHDILNAERQVIHAADDVTEPGSPARSYAF
CSDTRYIEDLVPQLQGVDLLYHEATFMEDNAQRAAEVYHSTAKQAATIAAQAKVGRLLIG
HFSSRYKQYDLFLGEARPVFPETYIATEGETMEIESWANPTL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgacgcagggggaagcatcagccgggacgccgattaacagtactattcctggt
cacgaaagtgaacaccaccaccgcccaaccagccccctgtttgcccttaccatactaggg
gctggttcggcaactccttcgttacggtaccatccaacagcccagctgctgacggtaggg
aacgactacatgcttattgactgcggtgaagggacgcagctccgattgatcgagcaaaag
atacggtcggggcggcttcgctacatctttatcagccatctccacggcgatcattatttt
gggttagctccactcctatccacgctgaatctggggggacggacggaagatctgtttctg
ttcggtccgcgcggcctggacgaaatcctgactaccatctttcggatgtcggattcgcgg
ctcggctatcggttgcactttcaggccgttgatcccgagacgccaaccctactgctcgat
cacccgcagttgacggtggagtcgattccacttcagcaccggatcgactgctcgggttat
ttgtttcgggaaaagcctcacccccggaagctgatccggcaacgactccccgatgacatt
ccggtaaattacctgaagcaacttaaagatggccacgacatcctgaacgcagagagacag
gtcattcacgcagccgatgatgtgactgagccggggtcgcccgcccgttcctacgccttc
tgctctgatacgcgctatattgaagacctggttccgcagctgcaaggcgtcgatctgctg
taccacgaagcaacgttcatggaagacaatgcccagcgagccgcggaagtttatcactcg
acggccaaacaggccgctaccattgccgcccaggcgaaggttggccggttgctgatcggg
catttttcgtcacgctacaaacagtatgatttgtttctaggcgaagccagacccgtattt
ccggagacgtatatcgctactgagggcgaaacgatggaaattgaaagctgggctaatccg
actttgtaa
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