Spirosoma oryzicola: LQ777_05690
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Entry
LQ777_05690 CDS
T08981
Name
(GenBank) outer membrane beta-barrel protein
Organism
soq
Spirosoma oryzicola
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OMP_b-brl_3
CarboxypepD_reg
CarbopepD_reg_2
TonB_dep_Rec_b-barrel
EMC7_beta-sandw
SpaA
NOMO_3rd
Motif
Other DBs
NCBI-ProteinID:
UHG92394
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Position
1416055..1419033
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AA seq
992 aa
AA seq
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MNHSFRSRLFFVCFLVGSLLSLTVGWAQAQSGTVKGAVVDSVSRKPLLEASVSLLLARDS
SLVTFAITDGEGQFVFKNIAEGQYRVLVTYVGYRGASRRVSVTKAEPVGNAGTLELLAQS
QTLTEVSVQGEKAPMAVKGDTLEFNAGSFKTQPNAQVEDLLKKLPGIQVDRDGTITAQGQ
TVKKVLVDGKPFFGDDPKMATRNLPADIIDKVQLMDQLSEQSAFSGVDDGDRSKTINITT
KKDKRKGTFGQQSLAVGPKPGDDARYSAKATLNRFSNGQQMSILGMANNINQQGFTAQDL
GLGNNFGGSGQGSGGNSGSGSFVRNGGGGGSGNGNGQVGNNAITKSWAGGMNYRNSIGKK
IDLAGSYNISNTNTLTNQSSRRENVLPSLGTSGTTTRTDSTFVRNQTNGSENSNTNSRVN
LRLDYRLDSLTTIRVIPNLSWLGSSYMNESQARTVNSAGRTTNTSNTNYNSTGDGFNGNN
SLFLFRKFRKVGRTFSVNWNVAMNNQDNEGINKSFTQSTTPLSTTTGASSTPTTSDSLYS
QTINQQNNQRTRSMTNTINVSYTEPLSMRQTLEFHYNLSNNHNESNRAVTDFNETTGQYD
RVNALLSNNFINTYMTNRGGLTWQTKRLKYTYALGLDGQQASLQSDNLSRETNLNRTFTN
LLPNALFTYNFAKNTTFRFNYRTRVNAPSVNQLQPVSINTNPLNIQLGNEALQPEYSHNL
SFNFNRFDPTTFRNLFASINASRTDNKIVNSTAFGPSGEQTTRPVNTDGYYTVSSFLVLG
RALRFQEQRVNLNLNTNLTYNRGTSFVNERPNLAQNWLIGQGLSLNTNLDDKLDLNLSGN
ISLQSAKYSLQPQQNTTYLNQTGTLDLYYQLPLRFTFTTNVTFNHYGGASGSYNQSFTLL
NMALSRQLFKQKQGELRLQAFDLLNQNRSVVRNVTDTYVEEVQSRVLNRYFTLSFVYNLR
NFGAGVTPPSNNRFMRPGGRDGQGDRGFRRNG
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgaaccattcttttcgttcgcgtctgtttttcgtctgttttctggtcgggagcctattg
agcttgaccgttggttgggcgcaggcgcaatcgggtactgttaaaggtgccgtcgtagat
tccgtctctcgaaaaccgttgcttgaagcgtccgtttcgctgttgttagcccgtgactcg
tcgctggttacgtttgcgattacggatggcgagggacaatttgtctttaaaaatattgcg
gaagggcagtaccgcgttctggttacctatgtcggttatcggggtgcttctcggcgcgtt
tcggtgacgaaggcagaacctgttggcaatgccggaacgcttgaattactggcgcagtcg
caaacgttgacggaggtatcagtacagggcgaaaaagctccgatggcggtcaaaggcgac
acgttggagttcaacgcgggctcgttcaaaacgcagccgaatgcgcaggttgaggatttg
ctcaaaaaactaccgggcattcaggttgaccgcgatgggaccattacggcgcagggacag
acggttaaaaaagtgctcgtcgatggaaaaccgttttttggcgatgacccaaagatggcg
acccgtaaccttcccgccgatattatcgataaagtacagttgatggatcagttatcggaa
cagtccgcgttttcgggcgttgatgacggcgaccggtcgaagacgatcaacatcacgacg
aagaaagataagcgaaaaggcacgtttggacaacagtcgctggcggttggtcccaaaccg
ggagacgatgcgcgctattcggcaaaagcaacgctcaaccggttcagcaatgggcagcag
atgtcgattctgggcatggcgaacaacatcaaccagcagggctttacggcgcaggattta
ggtctcggcaataattttggggggagcgggcaaggatcgggtggtaattcgggctcaggt
agctttgtgcgcaacggtgggggcggaggttcgggcaacggcaatggccaggtcggtaac
aacgcgattacaaagtcatgggcgggcgggatgaattaccggaacagtatcggcaaaaag
atcgatctggcgggtagctacaacatctcgaatacaaacacgctgaccaatcagagcagc
cgtcgggaaaacgttttacccagtctgggcacgtccggcacgacaactcgtaccgactcg
acgtttgtccgcaaccagacaaatggttccgagaacagcaatacaaacagccgcgtcaac
ctacggctcgattatcggttggactcgctcacaaccatccgggttattcccaatctgtcg
tggctaggatcgagctatatgaacgaaagccaggcgcggaccgtcaatagcgcagggaga
acgaccaacacgagcaataccaactacaattcgacgggcgacggcttcaacggcaacaac
tcgttgtttctgttccgtaaatttcgcaaggttggccggacattttcggtaaactggaac
gtggcgatgaacaatcaggataatgaaggcatcaacaagtcattcactcaatccacaaca
cccctgtctactacaaccggtgcatcatcgaccccgacgaccagtgacagtctgtattcg
caaaccattaatcagcagaacaaccagcggacacgttcgatgaccaacaccatcaacgtg
tcttacacggaaccgctgtcaatgcggcagacccttgagtttcactacaacctgtcgaac
aaccacaacgagtcgaaccgagcggtaacggattttaacgaaacgaccggccagtatgac
cgtgtcaatgcgttgttgagcaacaattttattaatacctacatgacgaaccggggtggg
ctgacctggcaaacgaagcgactaaaatacacctacgcccttggtcttgacgggcagcag
gctagcttgcaatcggacaaccttagccgggagacgaatctgaaccgcacgtttaccaac
ttgctcccgaacgcgctgtttacgtataatttcgccaaaaacacaacgttccggttcaac
taccgcacgcgggtcaatgcgccttcggtaaaccagttgcagcccgtatcgatcaatacg
aatccattgaatatccagttaggaaacgaggcactgcaaccagagtacagtcacaacctg
tcgttcaattttaaccggttcgacccgacaacgttccgtaacttatttgcgtcgatcaac
gccagccgaacagacaataagatcgttaattcaactgcattcggtccgtccggtgaacaa
acaacccggcctgtcaataccgacgggtattatacagtaagcagttttctggtactgggc
cgggcacttcgcttccaggagcaacgggtcaatctgaacctgaataccaacctgacttac
aaccggggaacgagctttgtgaacgagcgaccgaacctcgcgcaaaactggctgatcgga
cagggcctgagtttgaatacgaaccttgacgataagctggacttgaatctgtcgggcaat
atcagtttgcagtcggcgaagtattcgttgcagccacaacaaaacacgacctacctgaac
cagacgggtacgctggatttgtattatcagcttccgctccggttcacgtttaccaccaac
gtaacattcaatcactacggtggcgcgtcgggaagctacaaccagtcgtttacactgtta
aatatggccttgtctcgtcagttattcaagcagaagcagggcgagttgcgcttgcaggcg
tttgacctgctcaaccagaaccggagcgtggttcgtaacgtcacagacacgtacgttgaa
gaagtgcaaagccgggtgctgaatcgctattttacactaagctttgtgtacaacctgcgc
aacttcggggcaggtgttacgccaccgtcaaataatcgcttcatgcgtccgggcggccgc
gacggacagggcgatcgtggattccggcgaaacggataa
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