Spirosoma oryzicola: LQ777_05825
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Entry
LQ777_05825 CDS
T08981
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
soq
Spirosoma oryzicola
Pathway
soq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LQ777_05825 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soq03400
]
LQ777_05825 (ung)
Enzymes [BR:
soq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LQ777_05825 (ung)
DNA repair and recombination proteins [BR:
soq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LQ777_05825 (ung)
Prokaryotic type
LQ777_05825 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UHG92420
LinkDB
All DBs
Position
complement(1447942..1448607)
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AA seq
221 aa
AA seq
DB search
MNVSIAESWQTRLQPEFDKPYFVQLAEFLRQEYSTQRVYPPGRLMFNAFNACSFDDARVV
ILGQDPYHGEGQANGLAFSVADGITKPPSLVNIFKEIQDDLGKPVPKSGNLERWANQGVM
LLNSTLTVRAGQAGSHQGKGWETFTDAVIKLISDEKEHVVFMLWGAYAQKKGAVIDSKKH
LVLKSKHPSPMAAQWGGWFGNKHFSQANAYLESKGLPPIDW
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtatcaattgcagaatcctggcaaacgcggttacagcccgaatttgataagcct
tattttgttcaactagctgaatttttgcggcaggaatacagcactcaacgcgtgtatccc
cccggtcggcttatgttcaacgctttcaacgcgtgcagtttcgacgatgcacgggtggtc
attctcggccaggacccttaccacggcgaggggcaagccaatggtctggccttctcggta
gccgacggtattaccaaaccgccttccctagtcaatatcttcaaggaaattcaggatgac
ctgggcaaacccgttcccaaatcgggaaacctcgagcggtgggcgaatcagggcgtcatg
cttctaaactcgactctcaccgttcgggcagggcaggcaggatcgcaccagggcaaaggc
tgggaaacgtttaccgacgcagttattaaactaatctccgacgaaaaggagcatgtcgtg
tttatgctctggggcgcttacgcacagaaaaaaggagcggtaattgactcaaaaaagcat
ttggttctcaagtctaaacacccatcgccgatggcggctcaatggggtggctggtttggc
aacaagcattttagccaggccaacgcttatctggaaagcaaaggactccctcctatcgac
tggtag
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