KEGG   Spirosoma oryzicola: LQ777_05895
Entry
LQ777_05895       CDS       T08981                                 
Name
(GenBank) helix-hairpin-helix domain-containing protein
  KO
K02347  DNA polymerase (family X)
Organism
soq  Spirosoma oryzicola
Brite
KEGG Orthology (KO) [BR:soq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:soq03400]
    LQ777_05895
DNA repair and recombination proteins [BR:soq03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerase
    LQ777_05895
SSDB
Motif
Pfam: HHH_8 HHH_5 PHP HHH DNA_pol_B_thumb HHH_3 HHH_2 TfoX_C
Other DBs
NCBI-ProteinID: UHG92434
LinkDB
Position
1467240..1468973
AA seq 577 aa
MTNSEIVDLLELTGRLMELHDRDAFRTRAFQTAAFNLDKSTADLSNLSADELVKLPGVGK
AVAGKIREIAETGHLAELDALLAETPSGVLDMFRIKGLGVKKVRTLWQELGIDNLRDLQL
AGENGQIAKIKGFGANTQEKILAALEFLQEQQGKVRMDKAAMIANMLRDELVKHFERVEI
SGQVRRKAQEVDAVQLLIQTSDPISAMQILANLPNLQQNEPASSPFTWRGQLQGFDVQVE
LLLYPAEQLDRQLFIQTAADPHLQQVGNGGFSLLQTAQTTVNVAAEAELELEEVEKSIYA
RAGLPYIVPEMREDDFAFRWARSHRNDELVTWEDLRGTLHNHSTWSDGKQSVAGMAAYCR
ELGLTYFGIADHSKTASYANGLDSDRVRQQQQEIDQLNASFGSDFRIFKGIESDILGDGS
LDYDDATLATFDYVVASVHQTLTMSLEKATTRLLKAIENPYTTILGHPTGRLLLAREGYP
IDHRAIIDACAEHQVVIEINASPYRLDIDWRWIEYAMQQGVLLSINPDAHDLAGLLDMHY
GVAVGRKGGLTRDMTFNALTLAEMSDYLQKRRGRIHA
NT seq 1734 nt   +upstreamnt  +downstreamnt
atgaccaattccgaaatcgttgatctgctcgaattgacgggccgattgatggaacttcat
gatcgtgacgctttccggacgcgcgcttttcaaacggctgcgttcaacctggataaatcc
accgccgatttaagtaatctgtccgccgatgaactggttaagctaccgggtgttggcaaa
gcggtagcgggtaaaattcgggaaatcgcggaaacgggtcatttggctgagctggatgct
ttattggccgaaacgccctccggcgtgctggatatgtttcggatcaaagggctaggcgtt
aagaaagtgcggaccttatggcaggagttgggcatcgataatctgcgcgacctgcaactg
gcgggagaaaacgggcagatcgcaaaaattaaaggatttggtgccaacacgcaggaaaag
attttagccgcgctggagttcttgcaggagcaacaagggaaagtccgcatggacaaggcc
gccatgattgccaacatgctccgggacgaactggtcaagcattttgaacgggtggaaatt
agcggtcaggtacgccggaaagcgcaggaagtcgatgcggtgcagctgctcatccaaacc
agcgatcccatttcggccatgcagattctggcgaatctacctaatctgcaacaaaacgaa
ccggcatcatcgccgttcacctggcgggggcagcttcagggttttgatgtgcaggttgag
ttgttgttgtatcccgccgaacaactagatcgacagttgtttattcaaacagcagctgat
ccgcatttacaacaggttggcaatggtgggttttcactcttgcaaaccgcacaaacgact
gtcaatgttgctgccgaagccgaactggaattggaggaggtagagaaaagcatttacgcg
cgggctggattgccgtacatcgttcccgaaatgcgcgaagatgattttgcctttcgctgg
gctcgaagccatcggaacgacgaactggtaacctgggaagacctgcgcggaacgctgcac
aaccatagtacctggtcggatggcaagcagtcggtggctggtatggccgcttattgccgg
gaattgggcctgacgtattttggtatcgctgaccactccaaaacggccagctatgccaat
ggactcgacagcgaccgtgttcgacagcagcaacaggaaatcgaccagctcaatgccagt
tttgggtcagacttccgcatcttcaaaggcatcgaatcggatattttaggcgacggctcg
ctggactacgacgacgcaacactggctacgttcgattatgtggtcgcttcggtacaccag
accctaactatgtcgctcgaaaaagcaacgacacgcttattgaaggccatcgaaaatccg
tacacgacgatattaggtcatccaacgggccgcttgctgctggctcgcgaagggtatccc
atcgaccatcgggcaatcatcgacgcttgtgccgagcatcaggtcgtcatcgaaatcaac
gcgagtccttaccggctcgatatcgattggcggtggattgaatacgctatgcagcaaggc
gttttattaagcataaatcccgatgcgcacgacctggccggactgctcgatatgcactac
ggcgtagccgttggtcggaaaggtggcttaacccgagacatgacctttaacgcgctgacg
ctggccgaaatgagcgattacctacaaaaacgtcgggggcgcatacatgcgtga

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