Spirosoma oryzicola: LQ777_06825
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Entry
LQ777_06825 CDS
T08981
Name
(GenBank) translocation/assembly module TamB
KO
K09800
translocation and assembly module TamB
Organism
soq
Spirosoma oryzicola
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soq02000
]
LQ777_06825
Transporters [BR:
soq02000
]
Other transporters
Pores ion channels [TC:
1
]
LQ777_06825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
DUF748
T2SSN
EMC7_beta-sandw
PDGLE
Motif
Other DBs
NCBI-ProteinID:
UHG92613
LinkDB
All DBs
Position
1675952..1681039
Genome browser
AA seq
1695 aa
AA seq
DB search
MSVSKTLVRVLIGLLALILLIAGFVVLVATTPWGQQFVTKQVNSYLSQKLQSPFRIGRIG
YSIPDWIELDDVFFKTPQGDTLLNGGRMRVDLDMWSLLNNKVAINQIELERVQVNISRTL
PDTVFNFQYIVNAFTSPGPATPVDSTAKPMDINLTGITLKDVRIKYHDDVVGADVNAYVD
SLRANFNKTDINKSQYHLSDVMADGLNVYTRLYEGLPTPPSPPSDPSDSLDIGLGKWQVN
RAKWDVRVETADFRTQGSIGKLAMETNYFYLNGSKIGIKSLDLANADIAAVLTKPASKTA
AASAPASTTASTSGEPGWQANLTNVRFANNRIRFDDETAPRQKQGLDYGHLDLQNLGIDG
KFLSYADLGKRGQRVSGQLRNGRFRSTSGFVLQSLNGDVLYSDTTTTVNRLFVQTPSSVI
RDQLVLRYDSLGQLSDPRFAKRVGVRINLRQSRLSVDDVLQLAPFLADTPPFAGNRGGVF
RANAQAVGTLAALNIPRLEFDMLSGTRIVASGRLTNVTDPERLGVDVTVKEATTRLADIN
KLAPKGSIPSSIALPSDLRLTGQLKGQLNNLILDAKLNTSWGTAAFDGQLAGFVTGKNQT
YKGTLNLNDFDAGKWLKQEGTVGKITGRATVDGRGIDVNTLTTRFDLDVQSADLNGYQYQ
NLDASGSLANGTLDINGALKDPNANLKLDAKVGLKGDFPSIVGETVINELNLQKLKLYQD
PLSLKGRIVMDMASVDPAKPVGTISANDAVLTLQGKNYPVDSLYARLTANGNDKGVVAQL
PGARLTMNGQFEYTQLYDIIAGEVSKYIALPALKYKTIPPPYAFTINMKAYQNPLFQAFV
PELTRLDTVRLNAYLDNTRDTTLSATLRTGVIVYDTTTVRGSIMTLRGIDNQLRVNGRID
GILYDGLNIRETDLSGVAANNQLRFSVVNKDSINQDLHGVAGTLSIVDSSYRFRFAPNGL
LTNYQRWQTDTSGFAQYGNNGVLVNNLHIETDQQSLEINSTEQYANAPIRVTARAIEIAN
LARLANQDTTLAAGQLNGTVVVRDYMGEDNNLSFLGSVYVDSLQVMQKPIGDLTARFRNN
SDGRISVNTTLAGPYNDATVTGFYNPTDAKQALDLAINLNRLDARTIEAFSFGELRQARG
KLTGSFSVAGSTDNPKMDGSVAFDSVAFNIKQINATYRIDQEKLAFSGQTITLNDFNVRD
TLGRTLTTDGTVVLKNLPDASYNLRVRAANFQVLNAARKDNDYAYGQAAISADLRIKGVG
ASPSINGTVRLEDDSKIAIVLPDESTDVTESSKIVTFINHNDSLAIAKYLYKPKPDTAAT
TPRLQFEQLSNATISLDLEADEKSELTIVVDELNGDYLRARGNARLNVGMNAAGELTVLG
RYDVTEGEYSMTYEVLKRQFQIQKGGYIQFTGDPLKADINITAIYQVSTSPADLVGNEMS
TADAASLNRKLPFDVALTMSNNLAAPKLDFDIRLPDAENGNSAISSSPLAASIESKLKTL
RQDQSQINKQVFALLILNRFLPENTSDFFSGSGNGGLDTQAEGIARSSVSKLISDQLGRL
ASNVLKGFDVDFNLLSQTGSTNTGGTTNGARTDLNVGLSRSFLEGRLTVSVGRNFVLENA
ANSATRNPNEVFDNVSLNYNLTRDGRYILRGYRRNDYQAVLDGYIIETGVGFVITVDYNT
LSDIFRRRSPGPTLN
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgtcaaaaacgcttgtccgtgttttgattgggttgcttgctcttatcttgttg
atagcggggtttgtcgtgcttgtggcgactacaccttgggggcagcaattcgtgacgaaa
caggtaaactcttatttgtcccaaaaactacaatcgcctttccgcatcgggcgaatcggt
tattctatacccgactggatcgaactcgacgatgtattcttcaaaaccccccagggcgat
acactgctgaatggcggacgcatgcgcgttgacctcgacatgtggagcttactcaacaat
aaagtagccatcaaccaaatcgaactagagcgggttcaggtaaacatcagccggacattg
ccagatacggttttcaattttcagtacatcgtcaacgccttcacctcgcctggtcctgcc
acgcccgttgattcgacggctaagccaatggacatcaacctgacggggattacgcttaaa
gatgttcgcatcaaataccatgacgatgtggtgggggccgatgtcaatgcctatgttgac
agcctacgagccaatttcaataagacggacattaataaatcacagtaccatctatccgat
gtgatggctgatgggctgaacgtttatacccgtttgtacgaaggattgccaacgcccccc
agtccgcctagcgaccctagtgactcgctggacatcggcctgggaaaatggcaggtgaat
cgggctaagtgggatgttcgggtggagaccgccgattttcgtacccagggtagcatcggc
aaactggcgatggaaacaaactatttttacctgaacggatcgaaaataggcatcaagtcg
ctggatctggcaaacgccgatattgcggctgtactaacgaagccagctagtaaaacggcg
gcagccagcgcaccagcatcaacaaccgcatcaacttcgggcgaaccgggctggcaggca
aacctaacgaatgttcgtttcgccaataaccgcattcgcttcgacgacgaaaccgcgccc
cgacaaaaacaaggccttgattacggacacctcgatctgcaaaatctgggcatcgacgga
aaatttctgagctatgcggacttgggaaagcgcgggcagcgtgtcagcggtcagcttcgc
aatgggcgttttcggtcaacgagcgggtttgtgctgcaaagtctgaatggtgacgtactt
tacagcgatacgacaacgacggtgaacaggctgtttgttcagaccccaagctctgtcatt
cgggatcagcttgtgttgcgttatgattcattaggacagttaagcgatcctcgttttgcc
aaacgggttggtgttcggattaatttgcgtcagagtcggctgtcggtagatgatgttctg
caactggccccgttcctggccgatacaccaccgtttgccggtaaccggggtggggttttc
cgagccaatgctcaggcggtgggtacattggccgcgctaaatataccccgtcttgaattc
gatatgctgtccggtacgcggatcgttgccagcggtcggcttacaaacgtgactgacccc
gaacggctgggagtagacgtaacggtcaaagaagcgacgacacgactcgccgacatcaac
aagctggctcccaaagggtcaattccgtcgtctatcgcgttgccatccgatcttcggctg
acgggacagttgaaagggcaattgaataaccttattctggacgccaaattaaacacaagc
tggggaacggctgcttttgacgggcaactggctggcttcgtgacgggcaaaaaccagacc
tacaaaggaacgctcaacttgaacgatttcgatgccgggaagtggcttaagcaggaagga
accgttggcaaaataacgggccgggctaccgttgacggacgagggattgacgtaaatacg
ttgacgacccgctttgacctggacgtgcaatcggctgatctaaacgggtatcaatatcag
aatctggacgcgtcgggtagcttagcgaatggaacgctcgatatcaacggtgctctgaaa
gacccgaacgccaatctgaaactcgacgcaaaagttggtttaaagggtgatttcccgagt
atagtcggcgaaaccgttatcaacgagttgaacttgcaaaaacttaaactctatcaggac
ccattgtccctcaaaggacggatcgtgatggatatggcgtcggttgacccggctaaaccg
gtcggtaccatttcagcaaacgacgcagtgctgaccttgcaaggtaaaaactaccctgtc
gattcgctttacgcccggctgacggcgaatggcaacgataaaggagtagttgctcaactg
ccgggcgcgaggctgacgatgaatggtcaatttgagtacacccaactttacgacattatt
gccggcgaggtaagcaaatacattgcgttgcccgctttaaaatacaaaacgattcctcca
ccttatgccttcaccatcaacatgaaggcctaccagaacccgcttttccaagccttcgtg
cctgagttgacgcggctggatacggtccggctgaacgcttatctggacaatacccgagac
actaccctgtcagcaaccctccgaacgggcgttattgtctacgatacaacgaccgtgaga
ggaagcataatgacgctccggggcatcgacaatcagctgagggttaacggacgaatcgac
ggtattttgtacgatgggttgaatattcgggagacggatctgtcgggtgttgctgccaac
aatcagttacgtttttcggtcgtcaacaaggattcaattaaccaggatctgcacggggtg
gcggggacgctcagcattgtggattctagttatcgattcaggtttgcgccgaacggtctg
ctaaccaattaccagcgatggcaaaccgacacaagtggatttgcgcagtatggcaataat
ggcgtactggtcaacaacctgcacattgaaaccgatcagcaatcgcttgaaataaatagt
acggaacagtacgccaatgcgccgatccgggtaacggcgcgtgctatagaaattgcgaat
ctggcaaggttggcgaatcaggatacaaccttggccgctggacaactcaacggaacagtg
gttgttcgcgattacatgggcgaagacaacaacttgtcgttcttggggtctgtctacgtg
gatagcttgcaggttatgcagaaacctatcggtgatctgactgcccgtttccggaataat
tccgatggacgaatcagcgtaaacacgacccttgccgggccttacaacgacgccaccgtt
acgggtttctacaacccaacggatgccaagcaggcactggatctagcaattaatctgaac
cggctggatgcccgtacgattgaagcgtttagcttcggtgagttgcggcaagcccgagga
aaattgaccggtagtttcagtgtagccgggtctaccgataatccaaagatggatggtagc
gtagcatttgattcggtggcttttaatatcaaacagatcaacgctacgtatcggatcgat
caggaaaagctggctttttccgggcagaccattacgctgaatgacttcaacgtacgggat
acgcttgggcgaacgctgacaacggacggcaccgttgtgttgaaaaatctgcctgatgcg
agctataatctacgtgttcgcgcggctaattttcaggtcttgaatgccgctcggaaagac
aacgattatgcgtacgggcaggctgctatcagcgctgatctacgaattaaaggcgtagga
gcgagtccatcgatcaatggcaccgttcgtttggaagacgacagtaaaatagccattgtg
ctacccgatgagtcgaccgacgtaacggagtccagtaagattgtcacgttcattaatcac
aatgattcgttagccatcgcgaagtacttatataagccaaaacccgatacagcggcaaca
accccacgtcttcaatttgaacagcttagcaacgcgaccatctcgctcgatctggaggct
gacgagaaatcggagttaaccatcgtcgtggatgagttgaacggtgattacctgcgtgca
cgcggtaacgcccggctcaatgtaggcatgaatgccgccggggagttaaccgtgttaggg
cgttatgacgtgacggagggagaatattcaatgacttacgaagtgctgaagcggcagttt
cagattcagaaaggggggtatattcagttcaccggtgatccgctcaaagctgatatcaac
attacagctatctaccaggtatcaacctcgccagctgatctagttggaaacgaaatgtcg
acggccgatgccgcatcacttaatcgtaaactaccgtttgatgtcgcgctaaccatgagc
aataacctggcagcacccaaattggatttcgatattcggttgccagatgctgaaaatgga
aatagtgcaatctcgtcaagtccgctcgctgccagcatcgaaagtaagttgaaaacgttg
cgtcaggaccaatcacagatcaacaaacaggtgtttgcgttgctgatactgaatcgtttt
cttcccgaaaatacgtccgatttcttttctggatcgggcaatggcgggttagatacgcaa
gcagaaggaatcgcccggagtagtgtcagcaaacttatttcggaccagttgggacgattg
gcatctaacgttttgaaaggcttcgacgttgactttaacttactatcacaaacggggagc
actaatacaggcggaacaaccaacggggcgcgtactgatctgaacgtcggtttgtcgcgg
agttttctggaagggcggctgacggtttcggtcggccgaaacttcgttcttgaaaacgcg
gctaacagtgccacccgtaaccctaacgaagtttttgataatgtgtcgctcaattataac
cttacccgcgacgggcggtatattttacgcggttatcgtcgtaacgattatcaggccgtg
ctcgatggttacattattgaaacaggggttggatttgttattacggtggattacaatacc
ctatccgacatctttcgtcgtcggtcgcctggtccgacgctgaattaa
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integrated database retrieval system
