Spirosoma oryzicola: LQ777_12065
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Entry
LQ777_12065 CDS
T08981
Name
(GenBank) MBL fold metallo-hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
soq
Spirosoma oryzicola
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
soq03016
]
LQ777_12065
Enzymes [BR:
soq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LQ777_12065
Transfer RNA biogenesis [BR:
soq03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LQ777_12065
Prokaryotic type
LQ777_12065
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
HNH_repeat
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
UHG93612
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All DBs
Position
complement(2855391..2856269)
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AA seq
292 aa
AA seq
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MNLNITAYSTALFATWYFIEDLGLLFDAGDGLISSLLQKSRKIENVFISHADRDHLTGLL
QLNQLNAREGFPHIYFPNDSNSFRALEEFSKNFDRRVKQTVWSGMKEEEPVQINKNTFVQ
AVKNNHVRAAPNEHKSFGFLVYQTKAKLKEEYLALPQSEIVQLARSIGRETMTQEVRTNL
LAYSGDTPVENFDKWNNAQILIHEATFLDRNDIDSSDTRYNKHSSLEDVLKMVSELTLDA
LILGHFSSRYTHEQIDGKLKSLCKEFKIDIPVYRVLPGQTHRNILQETPVNH
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaatctaaacataacagcttattctaccgccttatttgcaacctggtatttcatcgaa
gacttgggactgctctttgacgccggtgacggactgatttcttcgctgttacaaaagtcc
agaaaaatagaaaatgtctttatttcccacgccgaccgggatcatctgaccggtttgtta
caactaaatcaactgaacgcccgcgagggttttccgcatatctatttccccaacgattcg
aattcgtttcgggcgctggaagagttttccaaaaacttcgacaggcgcgtaaagcaaacg
gtttggagcgggatgaaagaagaggaacctgtccagatcaacaaaaatacgtttgttcag
gccgttaaaaacaaccacgtccgagcagcgccgaacgaacacaaaagctttggctttctg
gtttatcaaacaaaagccaaattaaaggaagaatacctagcgttgccccaatcggaaatc
gtccagctggcgcgttctattggccgggagaccatgacccaagaggtcagaacgaatctg
ctggcatactcaggcgatacccccgtcgagaatttcgataaatggaacaacgcgcaaatt
cttattcacgaagcgacttttctggatcgtaacgacatcgatagctcggatacccgatat
aataaacatagtagcctcgaagatgtgctgaaaatggtttccgaacttaccctcgacgct
ttaatcctggggcatttttcgtcacgttacacgcacgagcagatcgacggcaaactaaaa
agcttgtgtaaagagtttaagatcgatattccggtgtaccgcgtactgcccggacaaacg
caccggaacatcttacaggaaacaccagtcaatcactga
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