Spirosoma oryzicola: LQ777_12090
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Entry
LQ777_12090 CDS
T08981
Symbol
dinB
Name
(GenBank) DNA polymerase IV
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
soq
Spirosoma oryzicola
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soq03400
]
LQ777_12090 (dinB)
Enzymes [BR:
soq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LQ777_12090 (dinB)
DNA repair and recombination proteins [BR:
soq03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
LQ777_12090 (dinB)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH
IMS_HHH_1
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
UHG88989
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All DBs
Position
2862226..2863266
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AA seq
346 aa
AA seq
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MDAFYASVEQRDNEHLRGKPVAVGGSRQRGVVAAASYEARQFGVRSAMASSIAIRKCPDL
IFVKPRFDVYKAVSAQIRGIFAQYTPLIEPLSLDEAYLDVTNNLVNNPSATRIAQAIKEQ
IRQETGLTASAGVSYNKFLAKLASDYRKPDGLFVIRPTEGAAFVEGLAVGQFHGVGRVTA
AKMNQLGIFTGADLRQKSEAFLTQHFGKVGHHYYSIANAVDHRPVTPDRVRKSVGSETTF
EQDLTDAPDLQNSLEPLLDSVWSYCQRTNVLGRTVTLKVKYADFQQITRSRTTPSLITDR
TLLKQVSNELLTSLLPVQKGVRLLGIALSSLQDWSTARNGQLSLDL
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggatgccttttacgcatccgtcgagcaacgggacaatgaacatcttcggggaaagccc
gttgcggtagggggctcccggcagcgtggtgttgtagccgctgccagttatgaagcgcgt
caattcggggttcgctcggcaatggcgtcgtccatcgcgattcgaaaatgccccgatctt
atttttgtaaaacctcgctttgacgtgtataaagccgtgtcggcgcagatacggggtatt
tttgcccagtacaccccgcttattgaaccgctctcactcgatgaagcgtatctggacgta
accaacaacctagtcaataatccgtccgctacccgaattgcccaggctatcaaagagcag
atccgacaagagacggggctgaccgcttcggctggtgtgtcgtacaacaaatttctggct
aagctggcatcggattaccgcaagcccgatggcttatttgttatcagacccactgagggc
gcagcctttgtggaaggattggctgttgggcagtttcacggggttggccgggttaccgca
gcaaaaatgaatcagttgggtattttcaccggcgcggatttgcgccagaaaagcgaagct
tttttgacccagcacttcggtaaagttggtcatcattactattccattgccaacgcagtc
gatcaccgcccggtaacgcctgaccgggtacgaaaatcagtgggttccgagacaacgttc
gagcaggatctcaccgatgctcccgacctgcaaaattccctcgaaccactactggacagt
gtatggagctattgccagcggacgaatgtgttggggcgaacggtgacgctgaaagtcaag
tacgccgattttcaacaaattacccgcagccgtaccacgcctagcctgattacggatcgc
acgctgctcaaacaggtgagtaatgaattgctaacctctttgcttcccgtgcaaaagggt
gtacggttgctaggtatagcgctgtcaagcctacaggactggtcgacagccaggaatggg
caattatcgctggatctgtga
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