Spirosoma oryzicola: LQ777_12585
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Entry
LQ777_12585 CDS
T08981
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
soq
Spirosoma oryzicola
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
soq03032
]
LQ777_12585 (gyrA)
03400 DNA repair and recombination proteins [BR:
soq03400
]
LQ777_12585 (gyrA)
Enzymes [BR:
soq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LQ777_12585 (gyrA)
DNA replication proteins [BR:
soq03032
]
Prokaryotic type
DNA Topoisomerases
LQ777_12585 (gyrA)
DNA repair and recombination proteins [BR:
soq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LQ777_12585 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
TPD52
Bap31_Bap29_C
DUF4615
Motif
Other DBs
NCBI-ProteinID:
UHG89082
LinkDB
All DBs
Position
2972811..2975324
Genome browser
AA seq
837 aa
AA seq
DB search
MAEENPDLESPSNIIPINIEDEMRGAYIDYSMSVIISRALPDVRDGLKPVHRRVLFGMAE
LGVNYNKPHKKSARIVGEVLGKYHPHGDSSVYDTMVRMAQDWSLRYPLVDGQGNFGSIDG
DSPAAMRYTEARLKRIAEELLTDIYKETVDFQPNFDDSLEEPSVMPAKLPNLLLNGSSGI
AVGMATNMAPHNLTEVVDGIVAYLDNNDITVEELMQYVKAPDFPTGATIYGMEGVKSAFK
TGRGRVVMRANATIEENRGKTQIIVTDVPYMVNKAVMLEKTAELINDKRIEGITAFRDES
DRDGLRVVYDLRKDAIPNVVLNNLYKHTALQSSFSINNVALVKGRPMLLNLKDMMKYYVE
HRFDVVTRRTQYELREAEKRAHILEGLLIALDNIDAVINLIRSSRDSDVARTGLMEQFSL
SDVQAKAILEMRLQRLTGLERDKLQAEYDELMREIANLKEILASEERKRQVIKEELLDIR
ARYGDERRTQINALGDGNISDLSLIADEDMVITISHEGYIKRTPTTEYRSQGRGGVGAKA
ATTKEEDFTEHLFTATMHNTLLAFTQKGRLYWLPVYELPEGSRTSKGRPLANFINIEGDD
KVRAVINVTDLKNEDYINNNYIVMCTRQGTIKKTMLEAFSRPRQNGIIAITIDEDDQLIG
VCLTNGDNDIVIASSAGKAVRFHESRVRPMGRTAAGVRGITLDEEDTTDHVVGMVCIDST
QAQLLVVSEKGYGKRSEIEEYRVTNRGAKGVGTLKVTEKVGRLVAILDVADNNDLMIINK
SGIAIRTPVTDISVIGRNTQGVRLISLRDGDAISSVTKIKQEEGEDGLVTESDEISA
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaaaatcccgacctcgaatcgcccagtaacattattcccattaacattgag
gacgaaatgcgtggggcttacattgattattcaatgtcggtcattatctcgcgcgccctc
cccgacgttcgtgacggcctgaagccggttcaccgtcgggtgctttttggtatggccgaa
ctgggggttaactacaataaacctcataagaaatcagcccgtattgtcggggaggtattg
ggtaaataccacccgcacggtgattcgtccgtttacgacacgatggttcgcatggcccag
gactggtcgttgcggtatccgctcgttgatggacaggggaactttggttcgattgacggc
gactcgcctgcggccatgcgctataccgaagcccggttaaagcggattgccgaagagttg
ctgactgatatttacaaagaaacggttgactttcaaccgaacttcgatgactcgctggaa
gaaccgtcggtgatgcccgcgaagttgccgaatctattgctcaacggttcgtcggggatt
gccgtcgggatggccaccaacatggctccgcacaacctgaccgaagtggttgatggcatt
gtcgcttacctggacaataacgatatcaccgttgaggaactgatgcagtacgttaaagcc
cctgactttccgacgggcgcgacgatctacggcatggaaggggttaagtcggcattcaaa
accggtcgtggccgggtggtgatgcgggcgaatgcaaccatcgaagaaaatcggggcaaa
acccagatcattgttacggacgttccgtacatggtcaacaaagcggtgatgctcgagaag
actgccgaactgatcaacgacaagcgcattgaagggatcaccgcgttccgggacgaatca
gatcgcgatggtctgcgagtggtgtacgatctgcggaaggatgctattccgaacgttgtt
ctgaacaacctgtataagcatacagcgctgcaatcgtcgttcagcatcaacaacgtcgcg
ctcgttaaagggcggccgatgctgctgaatctgaaagatatgatgaagtactatgtcgag
caccgcttcgatgtagtaacccgccggacgcagtacgagctgcgcgaagccgagaaacgg
gcgcatatcttagagggattattgatcgccctcgataatatcgatgcggtgattaacctg
atccgttcatcccgtgattccgatgttgcccgcacgggtctgatggagcagttttccctg
agcgacgttcaggcgaaagccattctggagatgcgtctgcaacggctgacgggtctggaa
cgggacaagctacaggccgagtacgacgagttgatgcgtgagatcgcgaacctgaaagaa
attctggctagtgaagagcgtaagcggcaagttatcaaagaagaattgctcgacatccgt
gcccgctacggtgacgaacgccggacccagatcaatgccctcggcgacggaaacatcagt
gatctttcgctgattgccgatgaggacatggtgatcaccatttcgcacgaaggctacatc
aagcgtacgccgacgaccgaataccgttcgcagggacgcgggggagtgggagcgaaggca
gctaccacgaaagaggaagattttaccgaacacctcttcaccgctaccatgcacaacacc
ctgctggcctttacccagaagggacgcttgtactggttgcccgtgtacgaactacccgaa
ggttcccgaacctcgaaagggagacccctcgccaacttcattaatattgaaggtgacgat
aaggtccgggctgtcatcaacgtgacggatctgaagaacgaggattacatcaacaataat
tacattgtgatgtgtacacgccagggcacgatcaaaaagacgatgctcgaagcgttctcc
cggccccgtcagaatgggatcatcgccattacgatcgatgaagacgatcagctgattggt
gtttgtctgaccaacggtgataacgacattgtgatcgcgtcaagtgcgggtaaagccgtt
cgcttccacgaaagccgcgttcgtccgatgggccgtacggctgcgggggtacgcggtatt
acgctggatgaggaagacaccacggaccacgtagtgggtatggtctgcattgactcaacg
caggcccagttgctggttgtttcggagaaagggtacggaaagcggtcagaaattgaggaa
tatcgagtaacgaatcgtggtgccaaaggcgttggaacattgaaagtaaccgagaaggtc
ggtcgtttggtggctatccttgatgtggctgataacaacgatctgatgattatcaataaa
tccggaatcgctatccggacgccggttaccgatattagtgtaattggccgaaacacgcag
ggtgttcgtctgatcagtctgcgcgatggcgatgccatttcgtcggtgacgaaaattaag
caggaggagggagaggatggtctcgtgactgaatccgacgaaatttccgcttaa
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