Spirosoma oryzicola: LQ777_12830
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Entry
LQ777_12830 CDS
T08981
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
soq
Spirosoma oryzicola
Pathway
soq00300
Lysine biosynthesis
soq00470
D-Amino acid metabolism
soq01100
Metabolic pathways
soq01110
Biosynthesis of secondary metabolites
soq01120
Microbial metabolism in diverse environments
soq01230
Biosynthesis of amino acids
Module
soq_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LQ777_12830 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LQ777_12830 (dapF)
Enzymes [BR:
soq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LQ777_12830 (dapF)
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
SidE_DUB
CntK_N
Motif
Other DBs
NCBI-ProteinID:
UHG89130
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All DBs
Position
complement(3033131..3033904)
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AA seq
257 aa
AA seq
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MDFYKYQGTGNDFVLVDDRAGAFSASDQAFIERLCHRRFGIGADGLILLQNDSEYDFRMV
YFNADGAEGSMCGNGGRCIVRFAHDLGVFESETRFMAVDGEHTALVNEGEISLKMSNVSG
IEQRNGLTFLNTGSPHVVQFVDDLESLDVVAEGRKIRYSAPFQPGGTNVNFAQVVDENTL
FVRTYERGVEDETYSCGTGVTAVALVAHQQLNTPTPVSIRTIGGNLRVSFTALADGRFEA
IHLIGPAQRVFTGTLPR
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggatttctataaataccagggcaccggtaatgatttcgtgctggtagacgatcgggcg
ggtgcgttttctgcttccgatcaggcgtttatcgaacggttgtgccatcggcggttcggc
atcggtgccgacggtttgattctgttacagaacgattccgagtatgacttcaggatggtt
tatttcaacgcggacggagccgaaggaagcatgtgcggcaacggtgggcgctgtatcgtt
cgttttgcgcatgatctgggggtattcgagagcgagacccggttcatggccgttgatggt
gaacataccgcgctggtaaacgaaggcgaaatatccttgaaaatgagcaatgtatccggt
attgagcaacgaaatggactgacatttctcaatacgggttctccccacgttgtccagttt
gtcgatgatctggagtcgcttgatgtcgttgccgaagggcgcaagattcggtatagcgct
ccgtttcaaccgggtggaacgaatgttaactttgcgcaggtggttgacgaaaataccctg
tttgtcagaacgtacgagcggggggtagaagacgaaacgtattcctgcgggacgggggta
acggcggtggccttggtggctcaccagcagttgaatacgcctactccggtctcgatacgg
accatcggcggtaacctgcgcgtctcgtttacggcgctggccgacggtcgctttgaggct
attcacttgattggtccagcgcagcgtgtgtttacgggtaccctgccccgctga
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