Spirosoma oryzicola: LQ777_12935
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Entry
LQ777_12935 CDS
T08981
Symbol
alaS
Name
(GenBank) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
soq
Spirosoma oryzicola
Pathway
soq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LQ777_12935 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
soq01007
]
LQ777_12935 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
soq03016
]
LQ777_12935 (alaS)
Enzymes [BR:
soq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
LQ777_12935 (alaS)
Amino acid related enzymes [BR:
soq01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
LQ777_12935 (alaS)
Transfer RNA biogenesis [BR:
soq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LQ777_12935 (alaS)
Prokaryotic type
LQ777_12935 (alaS)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
Motif
Other DBs
NCBI-ProteinID:
UHG93682
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Position
complement(3053418..3056081)
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AA seq
887 aa
AA seq
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MTSHEIRRHFLDFFRSKQHLIVPSAPLVAKNDPTLMFNNSGMAQFKDFFLGNGTPPSKRV
ADTQKCLRVSGKHNDLEDVGFDTYHHTMFEMLGNWSFGDYFKKEAITWAWELLTDVYQLP
KDRLYVSVFQGDDKDNVPFDQEAFDLWKPIVGEDRIIYGNKKDNFWEMGDTGPCGPCSEI
HVDLRSAEEIAEKSGKELVNADHPQVVEIWNLVFMQFNRKADGSLEPLPARHVDTGMGFE
RLCMAIQRKKSNYDTDVFSGTIRVIEELSGLSYGGTMEKPDVAMRVIADHIRAVSFAIAD
GLVPSNAKAGYVIRRILRRAIRYGYSYLSLTEPFMTKLVPTLAMQFADVFPELNAQRDFV
ATVIREEEIAFLRTLGSGLGRLDQIIGQLTTDGKNEIPGETVFELNDTFGFPADLTALIA
REKGLTIDEAGFQKALQEQKARSRKDAQSSAGDWVELAELDNKVEFVGYDQPEAYAQIVK
YRKIQNKQGTQVQVVLDKTPFYAESGGQIGDTGTLELFAGSDQIGTLTVTDTKKENDLVI
HLVQDVAGIDDLLTEADSVYAIINTERRGLTSSNHTATHLLHSALREVLGSHVAQKGSYV
GPDALRFDFSHFSKVTDEQLAQIERIVNEKIREDIKLDEKRNVPIEDAKALGATALFGEK
YGDFVRVITFDPNYSVELCGGTHVPATGHIGLFKFTGEGSVSTGVRRIEAKTSAGAEALV
NEQMAIVTELKDLLKAPKDVVKAVQTLLEERSALQKQVEALQNEKVQQLKNQLLEKVETA
GPGHARLVERVDVPSADALKQLAYDLKAKIDNLAVVLGADINGKPQLAVMLPDSLIQDRK
LNAGQVVKELAKNIKGGGGGQPFFATAGGSDLSGLDAALAQGKELLG
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgacttcccacgaaatacgtcggcattttctcgacttcttccgctcgaaacaacacctg
attgtgccatcggctccgctcgtcgccaagaacgacccgacgctgatgttcaacaactca
ggaatggcccagtttaaagatttctttctcggcaatgggacgcccccgtcgaagcgcgta
gccgatacccaaaagtgtctgcgggtgtcgggtaagcacaacgaccttgaggatgttggt
tttgatacctatcaccacacgatgttcgagatgctcggcaactggtcgtttggcgattac
tttaagaaagaagccattacgtgggcgtgggaactgctgacggatgtttatcaattaccg
aaagatcggctttacgtgtcggtgtttcagggtgacgataaagacaatgtgcctttcgat
caggaagcgttcgatctttggaaacccatcgttggcgaggatcggataatctacggcaat
aagaaagacaacttctgggaaatgggcgatacgggcccgtgcggaccgtgctcagaaatc
cacgttgatctgcgctcagcggaggaaatagccgaaaagtcaggaaaagaactggttaac
gccgatcatccgcaggtagttgaaatctggaacctggtgttcatgcagttcaaccggaag
gccgacgggtcgctggaaccactgcccgcccgtcacgtcgatacgggtatgggtttcgaa
cgtttgtgcatggccattcagcgcaaaaaatcgaactacgacaccgacgttttttcagga
acgatccgggtgatcgaagaactgtcgggcctgtcctacggcggcacaatggaaaagccg
gatgtagcgatgcgcgtcattgccgatcacatccgggctgtttcgttcgccatcgccgac
ggactggttccttccaatgcaaaagctggctacgttatccggcggattctgcgccgggct
attcgttacgggtattcgtacctgagcctgaccgagccgtttatgaccaagctcgtgcca
acgttagccatgcagttcgccgacgtgttccccgaactgaatgcccagcgtgatttcgtg
gcgacggttattcgggaagaagaaattgccttcctgcgtacactcggaagtggtttaggc
cgtctggaccagatcatcggccagttgacgaccgacggcaaaaacgaaattcccggcgaa
acggtattcgaactaaacgatacattcggcttccccgctgacttaacggctctgattgcc
cgcgaaaaaggcctgacgattgacgaagccggtttccagaaagcccttcaggagcagaaa
gcacgctcccgcaaagacgcgcaatcgtcggcgggcgactgggtggaactggctgaactg
gacaacaaagtcgagtttgttggttacgaccaaccagaagcgtacgcgcagatcgttaag
taccgtaagattcagaataagcagggtacgcaggtacaggttgtactggataaaacgccg
ttctacgctgaatcgggtggtcagattggcgatacgggtacgttggagctatttgcgggt
tctgaccaaatcggtacgctgacggtaaccgacactaaaaaagaaaacgacctggtgatc
cacctcgttcaggacgtagcgggtattgacgatttgctgaccgaagcggattcggtatac
gcgatcatcaacacggaacgtcgcgggctgactagcagtaaccacacggctacgcacctg
ctgcattccgccttgcgtgaggtattaggctcgcacgtggcgcagaaaggctcgtacgtt
ggacccgatgccctccgtttcgacttttcgcattttagcaaagtgacggatgagcaactc
gcccaaattgagcgcatcgtcaacgaaaaaatccgcgaagacatcaaactcgacgagaaa
cggaacgtacccatcgaagatgcgaaagcgttaggggctacggccttgttcggcgaaaaa
tacggagacttcgtgcgggtcatcacctttgatcccaactattcggttgagctatgcggg
ggaacgcacgtacccgcaacgggccacatcggtttgtttaagtttacgggagaagggtcg
gtttcgacgggggttcgtcggattgaagccaaaacatcggcgggtgccgaagccttggtc
aacgaacagatggccattgtcaccgaattaaaagacctgttgaaagcgcccaaagacgtc
gtcaaagcggttcaaacgttgcttgaagaacgcagcgccctgcaaaagcaggtcgaagcg
ttgcagaacgaaaaagtacagcaactgaaaaaccagcttctagaaaaagtcgaaaccgct
ggacctggtcacgctcgtctggttgaacgggtagacgtgccgtcggcggacgcgttgaag
cagttagcatacgatctgaaagcgaaaatagacaatctggctgtcgtacttggagccgac
attaacgggaaaccgcaattggccgtcatgctgcccgattcgcttattcaggacagaaaa
ttgaatgccggtcaggtcgtgaaagagctggctaagaacatcaaaggcggtgggggtggc
cagccgttttttgccaccgctggcggttccgatctgtcgggattagacgcggctttggca
cagggtaaagagttgttaggataa
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