Spirosoma oryzicola: LQ777_13410
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Entry
LQ777_13410 CDS
T08981
Name
(GenBank) PAS domain S-box protein
Organism
soq
Spirosoma oryzicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_4
Response_reg
HATPase_c
PAS_3
HisKA
PAS_8
PAS_7
Diguanyl_cycl_sensor
Hpt
PAS_12
HATPase_c_2
IIGP
YqzH
GLE1
Motif
Other DBs
NCBI-ProteinID:
UHG89241
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Position
complement(3149947..3152793)
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AA seq
948 aa
AA seq
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MTQVDDSNLLRRRLEREKRARVEAEAILEKKALELYNANEQLQHLNENLEQQIQAKLAEL
QESEQRYRQLIESVQDIIYKISPEGVFTFVNSVVEKLLGYTEQEFVGKHFTDIVAPGYRK
ATLAFYQSMLEERIDSTYSEFPVVAKDGRTVWIGQTVRFIELEGNIAELVAVARDISDRK
LAESQLQRTQTRLSTLITSLESGILVKDEQQRVILANQLFCDMFGIQDAPEQLIGQDYSR
SVEFIKGSMEDPEAFAQQVEQLMQDRQAVTGEEIRMVNGRILERDYIPIFLKEQYMGHLW
KYTDVTDKYLARERIRRSEEKYRGIMNNMELGLLEVDHNQTIIRSYERFCQMVGYAEEEL
VGKHAADLLVAPEFRNVINQQQITRKQGNASSYEMQLIRKDGSRIWALVSGVPILDEEGK
IVGSIGIHYDLTERKQLEEELARAKRIADEARLAEKQFLANMSHEIRTPLNAIIGMSHLL
FDTKPDQQQREYIDILKTSANFLHSLISDLLDMTKIEAGRIEVHARPFDLTGLLRSIQKV
FEMKLKDRAISIDVMLDARISGDFVGDDVMLNQILMNLVGNAEKFTEEGSIQITARLKKQ
EAAKYWIEFAVVDTGIGIPKEKLDLVFQKFKQVNPHGHKHKGTGLGLAITKELVEIQGGT
IAVRSHVGEGSQFTFTLPFGKSETPSEPVVVAPGNVPLCDDTLGCHVLIVEDNLMNQKYI
TSLLTKWNVPYTLALDGKHAVEEAKKQRFDIILMDIQMPIMDGYEASVAIRSSHNPNQNI
PIIALTASAMLDQKNLALEAGMNDFLTKPFEPAQLRSLLQQYAPAEMVHDGDTMLDWERL
NLLYGSDMEYTAEMLSIFLSDIVPEIMELPVLCQEDKRTELGQKVHKLKPTFGMVGLSQL
EGKMAQLEKIVKQGSKDELLEIYCNDIIVKVNEMIPVIKKEIQKITPA
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgacacaggtagacgatagcaacctactaagaagacgtctggagcgcgaaaagcgggcc
cgggttgaggccgaagctattctagagaaaaaagcgctggaattatacaacgccaatgag
cagcttcaacacctcaatgaaaatctggagcagcaaatccaggccaaattagcggagctg
caagaaagcgaacagcggtatcgtcagttgatcgagtctgttcaggatattatttataaa
atatcacccgaaggcgtctttacgtttgtcaactcggtcgtcgaaaaattactgggctat
accgagcaggaatttgttggcaaacattttaccgatattgtagcgcctggttaccggaag
gccacccttgctttctaccagtcgatgctggaagagcgtatcgacagcacatatagtgag
tttccggtggttgccaaagatgggcgaacggtctggattggtcaaaccgttcggtttatc
gagttggaaggcaatatagcagaactcgtggcggtagcgcgcgacatatccgaccggaaa
ctggccgaaagtcagttgcaacggacccaaacccggctttcaaccctgataaccagtctg
gaatccggcattctggtaaaagatgaacagcagcgtgtcattttggctaatcagcttttt
tgcgacatgttcggcatccaagatgctcccgagcaactaatcgggcaggattactcgcgg
tcggttgaatttatcaagggttcgatggaagaccccgaggccttcgcgcagcaggttgaa
cagttaatgcaagaccggcaggccgtcactggggaagaaatcagaatggtgaacggccga
atcctggagcgcgactatatccctatatttttgaaggagcagtacatgggacatttgtgg
aaatacacggatgttaccgacaagtacctggctcgcgaacgcattcgccgaagcgaagaa
aaataccggggtatcatgaataatatggagcttggtttgctggaggttgatcacaaccag
accattattcgttcctacgagcgtttctgtcaaatggttggttacgccgaggaggaactg
gttggtaaacatgccgctgacctgctggttgccccggagtttagaaatgtcatcaatcag
cagcaaattacgcgaaagcaggggaatgccagctcgtacgaaatgcagttgattcggaaa
gacggtagccggatctgggcactggtcagtggtgtaccgatcctggacgaagaggggaag
attgttggctcgatcggcattcattacgacctgaccgaacgcaagcaactggaagaggaa
ttggcgagagcaaaacgaattgcggatgaagctcggctggccgaaaagcagtttttggct
aacatgagtcacgagatccgaacgcccctcaacgcaatcattggcatgtcgcacctgttg
ttcgataccaaacctgatcagcagcagcgcgagtatatcgatattttaaaaacatccgct
aattttttgcacagcctgatttctgatttattagatatgaccaagattgaagctggacgg
attgaggttcacgctcgaccgttcgatttgacgggcctgctgcggtccatccagaaagta
ttcgagatgaaactaaaggatcgcgccatttcaatcgatgtcatgctggatgcccgcatt
tccggcgattttgtcggtgatgacgtgatgctgaaccagatcctgatgaatctggtcggt
aatgccgaaaaatttaccgaagaaggcagtattcagattaccgcccggctgaaaaaacag
gaagccgccaaatactggattgaatttgcggttgttgacacgggcattggcataccgaaa
gaaaaattagacttggtgtttcaaaagttcaagcaggtaaatcctcacgggcataagcac
aaaggcaccgggctgggtttagccattaccaaagaactggtcgaaattcagggagggacc
atcgccgtcagaagtcacgttggggaaggaagtcagttcacgtttacgcttcctttcggc
aaaagtgaaacgccatcggaaccggtcgtagtagctccgggcaacgtacccctgtgcgat
gatacgctggggtgccacgtactgatcgtggaagacaacctgatgaatcagaagtacatc
actagtcttcttacgaagtggaacgtaccctatacgcttgctctggacggtaaacacgcc
gttgaggaagcaaaaaaacaacgcttcgacatcattttgatggacatacaaatgcctatc
atggacgggtatgaagcctccgtggccatccgcagttctcataaccccaatcaaaatata
cccattattgcgttgaccgcatccgctatgcttgaccaaaaaaacctggctcttgaagcc
ggaatgaatgatttcctgaccaaacccttcgaaccagctcagcttcggtcgttgttgcag
cagtacgcccccgccgaaatggtacatgatggcgatacgatgcttgactgggagcggctg
aatcttctgtatgggtccgatatggaatacacggctgagatgctttccatctttctatcg
gatattgttccggagattatggagttgcccgttctttgccaggaagataaacgaacggaa
ttaggccagaaagtgcataagttaaagccgacgtttgggatggttggcttatcgcagctg
gaaggaaaaatggcacagttagaaaaaatagtaaaacaagggtctaaagatgagctgtta
gaaatctattgtaacgatataatcgtaaaggttaatgaaatgattccggttataaagaaa
gagatacaaaagattactccagcgtaa
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