Spirosoma oryzicola: LQ777_13475
Help
Entry
LQ777_13475 CDS
T08981
Name
(GenBank) DeoR/GlpR family DNA-binding transcription regulator
Organism
soq
Spirosoma oryzicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
E3_UFM1_ligase
GntR
DUF1670
HTH_29
HTH_Mga
HTH_24
HTH_Tnp_ISL3
Mga
HTH_AsnC-type
HTH_36
HTH_Crp_2
CggR_N
HTH_20
PaaX
FeoC
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
UHG89254
LinkDB
All DBs
Position
3169561..3170319
Genome browser
AA seq
252 aa
AA seq
DB search
MSVAFLKDERKELIIKQIGLHTRMSLTDLATTLNVSEDTIRRDINDLSEEGKLIKIRGGA
MSKAYHHSSQLQETYAHQNKITIAEKALTLLHDGMLILIGGGTTIREFIKMIPTDLKATF
ITVNPLTAVELLDKPNLEIIMIGGQISRYSRMSVGGEVYQRLSELRVDLCIMGTNAIDPK
EGLTDSDWETVQAKKAMIRAAQKVAVLAIAEKMNSVMRMKVADLDQIDYLVTELSADSVQ
LAPYRTGQTNVL
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttgctttcttaaaggacgagcgtaaagagttaattattaaacagataggactc
cacacgcggatgagcctaacggatttggctacgacactcaacgtgtcggaagacacgatt
cgacgcgatatcaatgatctgtcggaagaaggtaagctgatcaagattcgtgggggtgct
atgtcaaaagcgtatcatcactcgtcacagttgcaggaaacgtacgcacatcaaaataaa
ataacgattgcggagaaagccttgacgctacttcatgacggtatgcttattctgatcggt
ggcggaacaaccatccgggagtttatcaagatgataccaacggatctgaaagccaccttc
atcaccgtaaacccgctgacagccgttgagctgctggacaagcccaatctggaaatcatt
atgattggcgggcaaatttcccgctatagccgaatgagcgttgggggcgaagtgtaccag
cggctgtctgagttacgggtcgatctgtgcattatgggaacaaacgccattgaccccaaa
gaagggctgaccgactcagactgggaaacggtacaggcgaaaaaagccatgattcgggcg
gctcagaaggtagcggtattggccatcgccgagaaaatgaatagcgtcatgcgcatgaaa
gttgcggatttagaccagatcgattacctggttacggaactatccgctgactccgtacaa
ctggctccttaccggaccggacagacaaacgtgctttaa
DBGET
integrated database retrieval system
