Spirosoma oryzicola: LQ777_14720
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Entry
LQ777_14720 CDS
T08981
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
soq
Spirosoma oryzicola
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
soq03110
]
LQ777_14720
Chaperones and folding catalysts [BR:
soq03110
]
Heat shock proteins
HSP100
LQ777_14720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
nSTAND3
AAA_22
IstB_IS21
UVR
RuvB_N
ResIII
TniB
ATPase_2
AAA_18
AAA_3
AAA_14
AAA_7
AAA_25
NACHT
PhoH
Zeta_toxin
bpMoxR
Torsin
DNA_pol3_delta2
AAA_24
KTI12
DUF87
SLFN-g3_helicase
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
UHG89496
LinkDB
All DBs
Position
complement(3472424..3474955)
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AA seq
843 aa
AA seq
DB search
MEAKFSNRVKEVITLSREEALRLGHDYIGTEHLLLGMIREGEGVAVGLLKKLGISLDELR
VTIEQATKGTATNNVKNLANIPLTRQSEKTLKITYLEAKIFKSPLIGTEHLLLSILRDED
NVATQILNKFNVNYEVIKEMLEYQSSGSRPVMGPETDDDDNDRGMFGGGGSSSSGKDPKG
SEKSRTPVLDNFGRDLTKLAEVGKLDPIVGREKEIERVAQILSRRKKNNPILIGEPGVGK
TAIAEGLALRIVQKKVSRVLFGKRVVTLDLASLVAGTKYRGQFEERMKAVMNELEKSPEV
ILFIDELHTIVGAGGASGSLDASNMFKPALARGDIQCIGATTLDEYRQYIEKDGALARRF
QMVMVDATSIEETIEILNNIKDKYEDHHHVNYTPEAIEAAVKLSERYISDRFLPDKAIDV
LDEVGARVHISNITVPEDILKLEEQIENIKKEKNQVVKSQKYEEAAQLRDKEKRLIDQLD
RAKQAWEEDTKKRRYTVNEESVAEVVAMMTGIPVTSVSNDEGKKLVNMGEELKGRVIGQN
AAIEKLVKAIQRTRVGLKDPKKPIGSFIFLGPTGVGKTELAKVLATYLFDKDDALVRIDM
SEYMEKFSVSRLVGAPPGYVGYEEGGQLTEKIRRKPYSVVLLDEIEKAHPDVFNILLQVL
DDGILTDGLGRRVDFRNTIIIMTSNIGVRDLKDFGAGIGFATRKSAETQDELMKNTIQSA
LRKAFSPEFLNRLDDVIVFNSLQREDIHRIIDLMLGKLLGRVTNLGYTVQLTEKAKDFLS
EKGYDPQYGARPLSRAIQRYLEDPVAEEILKGELKEGDVIMADYPGEGEVLTITVKKPEA
VVE
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaaaattctcaaaccgcgtcaaggaagttatcacgctaagtcgggaggaagcc
ttgcgcttaggccacgactacatcggcaccgaacatctgctgttaggcatgattcgtgag
ggcgagggtgtggccgtcgggctactgaaaaaactcggtatctcgctcgacgaactccgg
gtcactattgaacaggcgacgaaaggaacggctacgaacaatgtgaaaaacctggcgaat
attccactgacccgtcagtcggaaaaaacgctgaaaatcacgtacctggaagctaagatt
ttcaaaagcccgctcattggaacggagcatttgttactatcgattctgcgcgatgaagac
aatgtcgccacgcagattctgaataagttcaacgttaactacgaagtcattaaagaaatg
ctcgaatatcagtcttcgggaagccgtccagtgatgggccccgaaaccgacgatgacgac
aatgaccggggcatgttcggtggtggcggtagttccagttcgggcaaagatccgaagggt
tctgagaagtcgagaacacctgttcttgataactttggccgtgacctgaccaaacttgct
gaagtcggtaaacttgatccgattgttggtcgtgaaaaagaaattgagcgtgtggcccaa
atcctgagccgccggaagaaaaataacccgatcctgattggtgagccgggcgtcggtaag
acggccatcgccgaaggacttgctctgcgcattgtgcagaaaaaagtatcgcgggtactg
ttcggcaaacgcgtcgtaacgctcgatctggcatcgctcgttgctggcacgaaataccgt
ggtcagttcgaagagcggatgaaagccgtcatgaacgagctggagaagtcgccggaagta
atcctgttcatcgatgagttgcataccatcgtaggagctggtggtgcgtcgggttcactc
gatgcctcgaacatgttcaaaccagcactagcgcgcggtgacattcaatgtattggtgct
accacgcttgacgagtatcgtcagtacatcgagaaagatggtgcgttagcccgtcgtttc
cagatggtcatggtcgatgctacgtcaatcgaagaaaccattgaaatcctgaataacatc
aaggataaatacgaagatcaccaccacgttaactacacacccgaagcgattgaggctgct
gtgaagttatcggagcggtatatctcggaccggttcctacccgacaaagccattgacgtg
ctggatgaagtcggtgctcgcgtacacatctcaaacatcacggttcccgaagatatttta
aagctcgaagagcagattgagaatattaagaaggagaaaaaccaggttgttaagagccag
aaatacgaagaggctgctcagcttcgcgataaagaaaaacgcctgatcgatcaactcgac
cgtgccaagcaggcatgggaggaagatactaagaaacgtcgctacacggtaaacgaggaa
agcgttgccgaagtcgttgcgatgatgacgggtatcccagtcacgagcgtatcgaatgat
gaaggcaagaaactcgtcaacatgggcgaggagctgaaaggtcgggttattggacaaaac
gctgctatcgagaaactggtgaaagccattcagcggacgcgcgttggtctgaaagatcca
aagaaaccaatcggttcgtttatcttccttggcccaacgggtgttggtaagacagagctt
gcgaaagtactggctacctatctcttcgacaaagacgatgcgctggttcggatcgatatg
tcggagtacatggagaaattcagcgtcagccgactggttggagctcctccgggctacgtg
ggttacgaagaaggtggtcagttgaccgaaaagattcgtcggaaaccatacagcgttgta
ttgttggatgagatcgaaaaagcgcacccagatgtgttcaacattctgctgcaagtgctt
gatgatggtatcctgacagacggtctgggccgccgggttgatttccggaacacgatcatc
atcatgacgtcgaatatcggggttcgtgatctaaaagattttggagccggtattggtttc
gcgacacgcaagtctgccgaaacgcaagacgagctgatgaagaacacgatccagagcgcg
ctgcgcaaagcgttctcaccggagttcttaaaccgtcttgacgatgtgattgtgtttaac
tcactgcaacgtgaagacattcaccgcatcatcgatcttatgctgggtaaactcctggga
cgcgtaaccaaccttggctacactgtccagctgaccgagaaagcgaaagatttcttatca
gaaaaaggatatgacccacaatacggtgctcgtccgctaagccgtgcgattcaacgttac
cttgaagatcccgttgcagaagaaattctgaaaggcgaattgaaagaaggtgatgtaatc
atggctgattatcccggcgaaggtgaagtacttaccatcacggttaagaagccggaagca
gtggttgaataa
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