Spirosoma oryzicola: LQ777_15995
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Entry
LQ777_15995 CDS
T08981
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
soq
Spirosoma oryzicola
Pathway
soq00300
Lysine biosynthesis
soq00470
D-Amino acid metabolism
soq00550
Peptidoglycan biosynthesis
soq01100
Metabolic pathways
soq01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LQ777_15995
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LQ777_15995
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LQ777_15995
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LQ777_15995
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
soq01011
]
LQ777_15995
Enzymes [BR:
soq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
LQ777_15995
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
LQ777_15995
Peptidoglycan biosynthesis and degradation proteins [BR:
soq01011
]
Precursor biosynthesis
Amino acid ligase
LQ777_15995
Racemase
LQ777_15995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
UHG89744
LinkDB
All DBs
Position
complement(3781979..3784483)
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AA seq
834 aa
AA seq
DB search
MTTQELQLDKFRWITDSRQVGEQATTSQTGESVFFAIQGEHHDGHNFIGELYQKGIRYFV
VERSALTPDRRAELIDYADAQFVEVDSSLLLVQTLAAEHRRQFRIPVVGITGSNGKTIVK
EWLAQLLADDFVIAKSPKSYNSQLGVPLSVHQLNASHTLGIFEAGISRPHEMQALEAIIR
PTIGIFTNIGTAHDEGFRTRKQKIAEKLRLFIHAETLIYCADYADIDEEVNLLLKAVNTD
MRFVTWSMTGREAVCQATLEQDRLTLSGPFGTVLLTIPFTDPASVENLMHCIVAMLTLRV
LDADALQSRLNRLRPVSMRLELKEGINNCVLIDDSYNNDVAGLQLALSFLNQQSTRGRRV
VILSDVLQSGQPESELYEQVANLIRANRVEQFIGIGPVLTQNRRFFADGSIFFPTTDAFL
TEFSVRELRDSDILVKGARPFSFERIVNRLQRKVHGTLLEINLDALTHNLNYYREKVGAN
TKIMVMVKAFAYGSGSAEVAQLLQFHRVDYLAVAYADEGVSLRQHGIDLPIMVMNPAPET
FATLLEYSLEPEIYSIRLLKEWSNFVAKHTEAETVALSSRSAQRKPCPIHLKIDTGMHRL
GFLEDELPVVIDYLKSYPNLRVETVFSHLVGADEAQFNSFSQQQFKTFLRATAALEAGLG
YRPTRHLLNSAGIVRFPEYRLDMVRLGIGLYGVESSQLDKEAVRPVGTLHTVISQIKAVP
AGESVGYSRRGVLDHDARIATLAIGYADGFDRRLGNGVGHVWINGVRCPTVGNVCMDMTM
VDVTQAPAAEGDDVIVFGDELRITELARQIGTIPYELLTGVSERVKRVFFKEGN
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgcaggaacttcagttagataaatttcggtggattaccgattcgcggcaggtg
ggcgaacaggccacgacgagtcagacgggagagtcggttttctttgccattcagggcgaa
caccacgatggacataattttattggcgagctgtaccagaaaggcattcgctattttgtc
gtcgagcggtcggcgctcacgcccgaccgccgggcggaactaatcgattatgccgacgcc
caatttgtggaggttgacagtagtttgctgctggtacagaccttagccgccgaacaccga
cgccagttccgcataccggttgttggtatcacgggtagtaacggcaaaaccattgtaaaa
gagtggctggcgcaactgctggccgatgattttgtgattgccaaaagtcccaaaagttat
aattcgcagttgggcgtacccttgtcggtgcatcaactcaacgcaagccatacgctgggt
atcttcgaagcgggcatttccaggccgcacgagatgcaggcgctggaagcaatcattcgc
ccgacaatcggcatttttacaaacatcggtaccgcacatgacgaaggattccggacgcgc
aaacagaaaattgccgaaaagctgcggttgtttatccatgccgaaacgcttatttactgc
gccgattacgccgacattgacgaagaagtaaacctacttctgaaagcggtaaacaccgac
atgcggtttgtaacatggtccatgacggggagggaggctgtttgtcaggcgacgttggaa
caggatcgactgacgctcagcgggccatttggtacggttctgcttacgattccgtttacc
gacccggcttcggttgaaaacttaatgcattgcatcgtcgcgatgcttacgttgcgcgtt
ctggatgctgacgccctgcaaagccgcctgaatcggctacgacccgtttcgatgcgcctg
gagttgaaagaaggaatcaacaactgcgtactgatcgacgattcgtacaacaacgatgta
gcgggtttgcaattagcgcttagctttctcaatcagcagagtacacgcggacgacgtgtt
gttattctgtccgatgtgttacagtcggggcagccggaatcggagctatatgagcaagtg
gcgaatctgattcgggcgaatcgcgttgagcaatttatcggaatcggacccgtacttacc
cagaatcgtcgtttttttgccgacggtagcattttctttccaacgaccgacgcattttta
accgagttttcggtccgtgaactgcgggatagtgatattctggtaaaaggggcccggccg
ttctcttttgagcgaatcgtcaaccggttgcaacgaaaagtacacggtacgttgctcgaa
attaacctggatgcgcttacccataacctgaactactaccgggaaaaagtcggtgccaat
accaaaatcatggtgatggtgaaggcatttgcgtacggcagtggcagcgcggaagtcgct
cagttattgcagttccaccgagtcgattatctggccgtagcgtacgctgatgaaggggtt
tcgctccgtcagcacggcattgatttaccgatcatggtcatgaatcccgcaccagaaacc
tttgcgacgctgcttgaatacagtcttgagccggaaatttacagcatacgcttgctgaag
gaatggagcaattttgtggctaagcacacggaggcagagacagtagctctctcatcgcgg
tcggcgcagcgcaaaccgtgtccgatacacctgaaaattgatacggggatgcaccggctg
ggctttcttgaagacgagctacccgtggtaatcgattacctgaaaagctacccaaacttg
cgcgtagagacggtattcagtcatttggtaggggcggatgaagcgcaattcaattcattt
tcgcagcagcagtttaaaacgtttctgcgggctacggcggcactcgaagcgggcttaggc
taccggccaacgcgtcatctgctcaattcggcgggtatcgtacgatttccggaataccga
ctggacatggtgcggctgggcattggtttgtacggtgttgagtccagccagctcgacaaa
gaggccgttcgtccggtagggacgttgcacacggtcattagccagatcaaggctgtgcca
gcgggcgaatcagtggggtatagccgccggggcgtgctggaccacgatgcccggattgct
accctcgctattggctacgctgacggttttgaccgccggttagggaatggagtagggcac
gtgtggatcaacggtgttcggtgcccaacagtgggtaacgtttgtatggatatgaccatg
gttgacgttacccaggcgcctgccgccgagggtgatgatgtgattgtctttggcgatgaa
ctacggattaccgaactggcccggcaaattggtacgatcccgtatgagctactgacgggg
gtcagcgaacgcgtgaagcgggtgttttttaaagaaggaaactaa
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